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Status
Public on Jul 14, 2007
Title
SWEGENE H_v2.1.1 55K
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
Swegene DNA Microarray Resource Centre
Manufacture protocol
Arrays were produced by the Swegene DNA micro array resource center at Lund University by using probes from Operon. Probes were recovered in Corning Universal Spotting Solution and printed on amino-silane-coated glass slides (UltraGAPS from Corning) using a MicroGrid2 robot (BioRobotics).
Support
glass
Coating
aminosilane
Web link
http://swegene.onk.lu.se Contributor(s)
Borg A Submission date
Jun 01, 2007
Last update date
Sep 02, 2011
Contact name
Johan Staaf
Organization name
SCIBLU - Swegene Centre for Integrative Biology at Lund University
Street address
Medicon Village
City
Lund
ZIP/Postal code
SE-223 81
Country
Sweden
Samples (680)
GSM233201 , GSM233202 , GSM233203 , GSM233204 , GSM233205 , GSM233206
GSM233207 ,
GSM233208 ,
GSM233209 ,
GSM233210 ,
GSM233211 ,
GSM233212 ,
GSM233213 ,
GSM233214 ,
GSM233215 ,
GSM233216 ,
GSM233217 ,
GSM233218 ,
GSM233219 ,
GSM233220 ,
GSM233221 ,
GSM233222 ,
GSM233223 ,
GSM233224 ,
GSM368489 ,
GSM368492 ,
GSM368493 ,
GSM368494 ,
GSM368495 ,
GSM368497 ,
GSM368498 ,
GSM368501 ,
GSM368502 ,
GSM368503 ,
GSM368504 ,
GSM368505 ,
GSM368507 ,
GSM368508 ,
GSM368509 ,
GSM368512 ,
GSM368514 ,
GSM368516 ,
GSM368518 ,
GSM368521 ,
GSM368522 ,
GSM457228 ,
GSM457229 ,
GSM457230 ,
GSM457231 ,
GSM457232 ,
GSM457233 ,
GSM457234 ,
GSM457235 ,
GSM457236 ,
GSM457237 ,
GSM457238 ,
GSM457239 ,
GSM457240 ,
GSM457241 ,
GSM457242 ,
GSM457243 ,
GSM457244 ,
GSM457245 ,
GSM457246 ,
GSM457247 ,
GSM457248 ,
GSM457249 ,
GSM457250 ,
GSM457251 ,
GSM457252 ,
GSM457253 ,
GSM457254 ,
GSM457255 ,
GSM457256 ,
GSM457257 ,
GSM457258 ,
GSM457259 ,
GSM457260 ,
GSM457261 ,
GSM457262 ,
GSM457263 ,
GSM457264 ,
GSM457265 ,
GSM457266 ,
GSM457267 ,
GSM457268 ,
GSM457269 ,
GSM457270 ,
GSM457271 ,
GSM457272 ,
GSM457273 ,
GSM457274 ,
GSM457275 ,
GSM457276 ,
GSM457277 ,
GSM457278 ,
GSM457279 ,
GSM457280 ,
GSM457281 ,
GSM457282 ,
GSM457283 ,
GSM457284 ,
GSM457285 ,
GSM551608 ,
GSM551609 ,
GSM551610 ,
GSM551611 ,
GSM551612 ,
GSM551613 ,
GSM551614 ,
GSM551615 ,
GSM551616 ,
GSM551617 ,
GSM551618 ,
GSM551619 ,
GSM551620 ,
GSM551621 ,
GSM551622 ,
GSM551623 ,
GSM551624 ,
GSM551625 ,
GSM551626 ,
GSM551627 ,
GSM551628 ,
GSM551629 ,
GSM551630 ,
GSM551631 ,
GSM551632 ,
GSM551633 ,
GSM551634 ,
GSM551635 ,
GSM551636 ,
GSM551637 ,
GSM551638 ,
GSM551639 ,
GSM551640 ,
GSM551641 ,
GSM551642 ,
GSM551643 ,
GSM551644 ,
GSM551645 ,
GSM551646 ,
GSM551647 ,
GSM551648 ,
GSM551649 ,
GSM551650 ,
GSM551651 ,
GSM551652 ,
GSM551653 ,
GSM551654 ,
GSM551655 ,
GSM551656 ,
GSM551657 ,
GSM551658 ,
GSM551659 ,
GSM551660 ,
GSM551661 ,
GSM551662 ,
GSM551663 ,
GSM551664 ,
GSM551665 ,
GSM551666 ,
GSM551667 ,
GSM551668 ,
GSM551669 ,
GSM551670 ,
GSM551671 ,
GSM551672 ,
GSM551673 ,
GSM551674 ,
GSM551675 ,
GSM551676 ,
GSM551677 ,
GSM551678 ,
GSM551679 ,
GSM551680 ,
GSM551681 ,
GSM551682 ,
GSM551683 ,
GSM551684 ,
GSM551685 ,
GSM551686 ,
GSM551687 ,
GSM551688 ,
GSM551689 ,
GSM551690 ,
GSM551691 ,
GSM551692 ,
GSM551693 ,
GSM551694 ,
GSM551695 ,
GSM551696 ,
GSM551697 ,
GSM551698 ,
GSM551699 ,
GSM551700 ,
GSM551701 ,
GSM551702 ,
GSM551703 ,
GSM551704 ,
GSM551705 ,
GSM551706 ,
GSM551707 ,
GSM551708 ,
GSM551709 ,
GSM551710 ,
GSM551711 ,
GSM551712 ,
GSM551713 ,
GSM551714 ,
GSM551715 ,
GSM551716 ,
GSM551717 ,
GSM551718 ,
GSM551719 ,
GSM551720 ,
GSM551721 ,
GSM551722 ,
GSM551723 ,
GSM551724 ,
GSM551725 ,
GSM551726 ,
GSM551727 ,
GSM551728 ,
GSM551729 ,
GSM551730 ,
GSM551731 ,
GSM551732 ,
GSM551733 ,
GSM551734 ,
GSM551735 ,
GSM551736 ,
GSM551737 ,
GSM551738 ,
GSM551739 ,
GSM551740 ,
GSM551741 ,
GSM551742 ,
GSM551743 ,
GSM551744 ,
GSM551745 ,
GSM551746 ,
GSM551747 ,
GSM551748 ,
GSM551749 ,
GSM551750 ,
GSM551751 ,
GSM551752 ,
GSM551753 ,
GSM551754 ,
GSM551755 ,
GSM551756 ,
GSM551757 ,
GSM551758 ,
GSM551759 ,
GSM551760 ,
GSM551761 ,
GSM551762 ,
GSM551763 ,
GSM551764 ,
GSM551765 ,
GSM551766 ,
GSM551767 ,
GSM551768 ,
GSM551769 ,
GSM551770 ,
GSM551771 ,
GSM551772 ,
GSM551773 ,
GSM551774 ,
GSM551775 ,
GSM551776 ,
GSM551777 ,
GSM551778 ,
GSM551779 ,
GSM551780 ,
GSM551781 ,
GSM551782 ,
GSM551783 ,
GSM551784 ,
GSM551785 ,
GSM551786 ,
GSM551787 ,
GSM551788 ,
GSM551789 ,
GSM551790 ,
GSM551791 ,
GSM551792 ,
GSM551793 ,
GSM551794 ,
GSM551795 ,
GSM551796 ,
GSM551797 ,
GSM551798 ,
GSM551799 ,
GSM551800 ,
GSM551801 ,
GSM551802 ,
GSM551803 ,
GSM551804 ,
GSM551805 ,
GSM551806 ,
GSM551807 ,
GSM551808 ,
GSM551809 ,
GSM551810 ,
GSM551811 ,
GSM551812 ,
GSM551813 ,
GSM551814 ,
GSM551815 ,
GSM551816 ,
GSM551817 ,
GSM551818 ,
GSM551819 ,
GSM551820 ,
GSM551821 ,
GSM551822 ,
GSM551823 ,
GSM551824 ,
GSM551825 ,
GSM551826 ,
GSM551827 ,
GSM551828 ,
GSM551829 ,
GSM551830 ,
GSM551831 ,
GSM551832 ,
GSM551833 ,
GSM551834 ,
GSM551835 ,
GSM551836 ,
GSM551837 ,
GSM551838 ,
GSM551839 ,
GSM551840 ,
GSM551841 ,
GSM551842 ,
GSM551843 ,
GSM551844 ,
GSM551845 ,
GSM551846 ,
GSM551847 ,
GSM551848 ,
GSM551849 ,
GSM551850 ,
GSM551851 ,
GSM551852 ,
GSM551853 ,
GSM551854 ,
GSM551855 ,
GSM551856 ,
GSM551857 ,
GSM551858 ,
GSM551859 ,
GSM551860 ,
GSM551861 ,
GSM551862 ,
GSM551863 ,
GSM551864 ,
GSM551865 ,
GSM551866 ,
GSM551867 ,
GSM551868 ,
GSM551869 ,
GSM551870 ,
GSM551871 ,
GSM551872 ,
GSM551873 ,
GSM551874 ,
GSM551875 ,
GSM551876 ,
GSM551877 ,
GSM551878 ,
GSM551879 ,
GSM551880 ,
GSM551881 ,
GSM551882 ,
GSM551883 ,
GSM551884 ,
GSM551885 ,
GSM551886 ,
GSM551887 ,
GSM551888 ,
GSM551889 ,
GSM551890 ,
GSM551891 ,
GSM551892 ,
GSM551893 ,
GSM551894 ,
GSM551895 ,
GSM551896 ,
GSM551897 ,
GSM551898 ,
GSM551899 ,
GSM551900 ,
GSM551901 ,
GSM551902 ,
GSM551903 ,
GSM551904 ,
GSM551905 ,
GSM551906 ,
GSM551907 ,
GSM551908 ,
GSM551909 ,
GSM551910 ,
GSM551911 ,
GSM551912 ,
GSM551913 ,
GSM551914 ,
GSM551915 ,
GSM551916 ,
GSM551917 ,
GSM551918 ,
GSM551919 ,
GSM551920 ,
GSM551921 ,
GSM551922 ,
GSM551923 ,
GSM551924 ,
GSM551925 ,
GSM551926 ,
GSM551927 ,
GSM551928 ,
GSM551929 ,
GSM551930 ,
GSM551931 ,
GSM551932 ,
GSM551933 ,
GSM551934 ,
GSM551935 ,
GSM551936 ,
GSM551937 ,
GSM551938 ,
GSM551939 ,
GSM551940 ,
GSM551941 ,
GSM551942 ,
GSM551943 ,
GSM551944 ,
GSM551945 ,
GSM551946 ,
GSM551947 ,
GSM551948 ,
GSM551949 ,
GSM551950 ,
GSM551951 ,
GSM551952 ,
GSM551953 ,
GSM551954 ,
GSM551955 ,
GSM551956 ,
GSM551957 ,
GSM551958 ,
GSM551959 ,
GSM551960 ,
GSM551961 ,
GSM551962 ,
GSM551963 ,
GSM551964 ,
GSM551965 ,
GSM551966 ,
GSM622341 ,
GSM622342 ,
GSM622343 ,
GSM622344 ,
GSM622345 ,
GSM622346 ,
GSM622347 ,
GSM622348 ,
GSM622349 ,
GSM622350 ,
GSM622351 ,
GSM622352 ,
GSM622353 ,
GSM622354 ,
GSM622355 ,
GSM622356 ,
GSM622357 ,
GSM622358 ,
GSM622359 ,
GSM622360 ,
GSM622361 ,
GSM622362 ,
GSM622363 ,
GSM622364 ,
GSM622365 ,
GSM622366 ,
GSM622367 ,
GSM622368 ,
GSM622369 ,
GSM622370 ,
GSM622371 ,
GSM622372 ,
GSM622373 ,
GSM622374 ,
GSM622375 ,
GSM622376 ,
GSM622377 ,
GSM622378 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (5)
GSE9219 RNA quality and the influence on gene expression
GSE14755 Expression profiling of GIST: CD133 is associated with KIT exon 11 deletion, gastric location and poor prognosis
GSE18328 Identification of subtypes in HER2-positive breast cancer reveals a gene signature prognostic of outcome
GSE22133 Genomic Subtypes of Breast Cancer Identified by Array Comparative Genomic Hybridization
GSE25307 The retinoblastoma gene is targeted for rearrangements in BRCA1-deficient basal-like breast cancer.
Relations Alternative to
GPL14374 (condensed on CloneID)
Data table header descriptions ID CLONEID SPOT_ID Identifier for spot that do not contain Operon oligo probe
SPOT_ID_DESCRIPTION short description for SPOT_ID
ReporterID Reporter ID for spot, e.g., either CLONE_ID or SPOT_ID or an internal ID for the spot probe
OligoSet_genelist Oligo set genelist version number from which information from oligo probe provider is retrieved
OligoSet_geneSymbol Target gene symbol according to oligo probe provider
OligoSet_description Target description according to oligo probe provider
OligoSet_ensemblGene Target Ensembl gene according to oligo probe provider
OligoSet_ensemblTranscript Target Ensembl transcript according to oligo probe provider
ARRAY_BLOCK Array block number, i.e. a number from 1 to 48
BLOCK_COLUMN Column within array block
BLOCK_ROW Row within array block
GB_ACC GenBank Accession
PT_ACC Protein Accession
Data table ID CLONEID SPOT_ID SPOT_ID_DESCRIPTION ReporterID OligoSet_genelist OligoSet_geneSymbol OligoSet_description OligoSet_ensemblGene OligoSet_ensemblTranscript ARRAY_BLOCK BLOCK_COLUMN BLOCK_ROW GB_ACC PT_ACC 1
H200021335
Operon oligo: H200021335
H200021335
V2.1.3
1
1
1
2
H200008181
H200008181
V2.1.3
EIF4A2
Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II). [Source:Uniprot/SWISSPROT;Acc:Q14240]
ENSG00000156976
ENST00000356531,ENST00000323963
1
2
1
Q14240 3
H300008355
H300008355
V4.0.2
NP_078953.2
ENSG00000179299
ENST00000333934;ENST00000381782;ENST00000316607;ENST00000381780
1
3
1
NP_078953.2 4
H300007697
Operon oligo: H300007697
H300007697
V3.0.3
1
4
1
5
H300002929
TMEM31
H300002929
V4.0.2
TMEM31
ENSG00000179363
ENST00000319560;ENST00000372615
1
5
1
6
H300006491
FAM79B
H300006491
V4.0.2
FAM79B
ENSG00000188001
ENST00000345063
1
6
1
7
H300003857
Operon oligo: H300003857
H300003857
V3.0.3
1
7
1
8
H300006329
Operon oligo: H300006329
H300006329
V3.0.3
1
8
1
9
H300006095
Operon oligo: H300006095
H300006095
V3.0.3
ENSG00000162825,ENSG00000168614,ENSG00000122497,ENSG00000186275,ENSG00000179571
ENST00000302098,ENST00000359808,ENST00000359808,ENST00000354479,ENST00000338347,ENST00000310701,ENST00000356801,ENST00000356801,ENST00000270729,ENST00000322098,ENST00000287968,ENST00000254372
1
9
1
10
H300001154
Operon oligo: H300001154
H300001154
V3.0.3
1
10
1
11
H300006817
Operon oligo: H300006817
H300006817
V3.0.3
ENSG00000179311
ENST00000324508
1
11
1
12
H300009855
H300009855
V4.0.2
Q8TB43_HUMAN
IQSEC3 protein. [Source:Uniprot/SPTREMBL;Acc:Q8TB43]
ENSG00000181164
ENST00000326643
1
12
1
Q8TB43 13
H300006811
Operon oligo: H300006811
H300006811
V3.0.3
1
13
1
14
H300007227
Operon oligo: H300007227
H300007227
V3.0.3
ENSG00000197064,ENSG00000188887,ENSG00000198280
ENST00000356409,ENST00000340580,ENST00000357342
1
14
1
15
H300001846
H300001846
V4.0.2
NP_001013741.1
ENSG00000197926
ENST00000359905
1
15
1
NP_001013741.1 16
H300007455
Operon oligo: H300007455
H300007455
V4.0.2
1
16
1
17
H300007380
Operon oligo: H300007380
H300007380
V3.0.3
1
17
1
18
H300005447
Operon oligo: H300005447
H300005447
V3.0.3
ENSG00000182002
ENST00000319057
1
18
1
19
H300007368
Operon oligo: H300007368
H300007368
V3.0.3
1
19
1
20
-- empty
empty source well
NoOligoInfo
1
20
1
55488 8540 Kbytes .Supplementary data files not provided
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