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Platform GPL5401 Query DataSets for GPL5401
Status Public on Sep 29, 2007
Title Farnham human whole genome Hg17Tiling Set17
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Nimblegen Systems, Inc.
Manufacture protocol as described on Nimblegen website
Catalog number C4524-17-01 (note: this cat# corresponds to the Build_HG18 38-array Tiling Set)
 
Description Probes are 50bp long, separated by 100bp.
 
Submission date Jun 20, 2007
Last update date Sep 29, 2007
Contact name Kimberly Rose Blahnik
E-mail(s) krblahnik@ucdavis.edu
Organization name University of California Davis
Department Genome and Biomedical Sciences
Lab Peggy Farnham
Street address GBSF 1 Shields Ave
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Samples (1) GSM214950
Series (1)
GSE8667 Genome-wide Analysis of KAP1 Binding Suggests Auto-regulation of KRAB-ZNFs

Data table header descriptions
ID
CHROMOSOME chromsome number
RANGE_GB GenBank accession.version
RANGE_STRAND always plus
RANGE_START startpoint in genbank chromosome
RANGE_END endpoint in genbank chromosome

Data table
ID CHROMOSOME RANGE_GB RANGE_STRAND RANGE_START RANGE_END
chr6P163786364 chr6 NC_000006.9 + 163786364 163786414
chr6P163786464 chr6 NC_000006.9 + 163786464 163786514
chr6P163786564 chr6 NC_000006.9 + 163786564 163786614
chr6P163786664 chr6 NC_000006.9 + 163786664 163786714
chr6P163786764 chr6 NC_000006.9 + 163786764 163786814
chr6P163786864 chr6 NC_000006.9 + 163786864 163786914
chr6P163786964 chr6 NC_000006.9 + 163786964 163787014
chr6P163787064 chr6 NC_000006.9 + 163787064 163787114
chr6P163787164 chr6 NC_000006.9 + 163787164 163787214
chr6P163787264 chr6 NC_000006.9 + 163787264 163787314
chr6P163787364 chr6 NC_000006.9 + 163787364 163787414
chr6P163787464 chr6 NC_000006.9 + 163787464 163787514
chr6P163787564 chr6 NC_000006.9 + 163787564 163787614
chr6P163787664 chr6 NC_000006.9 + 163787664 163787714
chr6P163787764 chr6 NC_000006.9 + 163787764 163787814
chr6P163787864 chr6 NC_000006.9 + 163787864 163787914
chr6P163787964 chr6 NC_000006.9 + 163787964 163788014
chr6P163788064 chr6 NC_000006.9 + 163788064 163788114
chr6P163788254 chr6 NC_000006.9 + 163788254 163788304
chr6P163788354 chr6 NC_000006.9 + 163788354 163788404

Total number of rows: 384957

Table truncated, full table size 19548 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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