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GEO accession:
Platform GPL5401
Query DataSets for GPL5401
Status
Public on Sep 29, 2007
Title
Farnham human whole genome Hg17Tiling Set17
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens
Manufacturer
Nimblegen Systems, Inc.
Manufacture protocol
as described on Nimblegen website
Catalog number
C4524-17-01 (note: this cat# corresponds to the Build_HG18 38-array Tiling Set)
Description
Probes are 50bp long, separated by 100bp.
Submission date
Jun 20, 2007
Last update date
Sep 29, 2007
Contact name
Kimberly Rose Blahnik
E-mail(s)
krblahnik@ucdavis.edu
Organization name
University of California Davis
Department
Genome and Biomedical Sciences
Lab
Peggy Farnham
Street address
GBSF 1 Shields Ave
City
Davis
State/province
CA
ZIP/Postal code
95616
Country
USA
Samples (1)
GSM214950
Series (1)
GSE8667
Genome-wide Analysis of KAP1 Binding Suggests Auto-regulation of KRAB-ZNFs
Data table header descriptions
ID
CHROMOSOME
chromsome number
RANGE_GB
GenBank accession.version
RANGE_STRAND
always plus
RANGE_START
startpoint in genbank chromosome
RANGE_END
endpoint in genbank chromosome
Data table
ID
CHROMOSOME
RANGE_GB
RANGE_STRAND
RANGE_START
RANGE_END
chr6P163786364
chr6
NC_000006.9
+
163786364
163786414
chr6P163786464
chr6
NC_000006.9
+
163786464
163786514
chr6P163786564
chr6
NC_000006.9
+
163786564
163786614
chr6P163786664
chr6
NC_000006.9
+
163786664
163786714
chr6P163786764
chr6
NC_000006.9
+
163786764
163786814
chr6P163786864
chr6
NC_000006.9
+
163786864
163786914
chr6P163786964
chr6
NC_000006.9
+
163786964
163787014
chr6P163787064
chr6
NC_000006.9
+
163787064
163787114
chr6P163787164
chr6
NC_000006.9
+
163787164
163787214
chr6P163787264
chr6
NC_000006.9
+
163787264
163787314
chr6P163787364
chr6
NC_000006.9
+
163787364
163787414
chr6P163787464
chr6
NC_000006.9
+
163787464
163787514
chr6P163787564
chr6
NC_000006.9
+
163787564
163787614
chr6P163787664
chr6
NC_000006.9
+
163787664
163787714
chr6P163787764
chr6
NC_000006.9
+
163787764
163787814
chr6P163787864
chr6
NC_000006.9
+
163787864
163787914
chr6P163787964
chr6
NC_000006.9
+
163787964
163788014
chr6P163788064
chr6
NC_000006.9
+
163788064
163788114
chr6P163788254
chr6
NC_000006.9
+
163788254
163788304
chr6P163788354
chr6
NC_000006.9
+
163788354
163788404
Total number of rows:
384957
Table truncated, full table size
19548 Kbytes
.
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