Data table |
ID |
SEQUENCE |
GC% |
Internal Repeat Score |
Self-Annealing Score |
Primary Strain |
Primary Target |
Common Name of Primary Target |
Gene Symbol |
Strain SF370 |
Strain MGAS8232 |
Strain MGAS315 |
Strain SSI-1 |
Strain MGAS10394 |
Strain 71-724 |
Strain MGAS6180 |
Strain MGAS5005 |
Strain MGAS9429 |
Strain MGAS10270 |
Strain MGAS2096 |
Strain MGAS10750 |
ORF |
SPOT_ID |
QSY00001_A_1 |
AATCCAACTTACCTTATTGAGTCTTTAAAAGCTATTAAAAGTGAAACAGTAAAAATTCATTTCTTATCAC |
25.71 |
32 |
107 |
MGAS9429 |
MGAS9429_Spy0002 |
"DNA polymerase III, beta chain" |
dnaN |
SPy_0003::70::100.0::7.9E-11::+ |
spyM18_0002::70::100.0::7.9E-11::+ |
SpyM3_0002::70::100.0::7.9E-11::+ |
SPs0002::70::100.0::7.9E-11::+ |
M6_Spy0002::70::100.0::7.9E-11::+ |
|
M28_Spy0002::70::100.0::7.9E-11::+ |
M5005_Spy_0002::70::100.0::7.9E-11::+ |
MGAS9429_Spy0002::70::100.0::7.9E-11::+ |
MGAS10270_Spy0002::70::100.0::7.9E-11::+ |
MGAS2096_Spy0002::70::100.0::7.9E-11::+ |
MGAS10750_Spy0002::70::100.0::7.9E-11::+ |
MGAS9429_Spy0002 |
|
QSY00001_A_10 |
ATCTTAATTAGTCTAAAAGATAGTATCGATAGTGGTGATATAGATCTGATTACTAGAGTTTATGACACGG |
31.43 |
31 |
110 |
MGAS6180 |
M28_Spy0199 |
sensory transduction protein kinase |
fasC |
SPy_0244::70::98.57143::2.3E-10::+ |
spyM18_0226::70::98.57143::2.3E-10::+ |
SpyM3_0173::70::97.14286::1.7E-10::+ |
|
M6_Spy0236::70::98.57143::2.3E-10::+ |
|
M28_Spy0199::70::100.0::8.9E-11::+ |
M5005_Spy_0205::70::98.57143::2.3E-10::+ |
MGAS9429_Spy0206::70::97.14286::6.0E-10::+ |
MGAS10270_Spy0205::70::97.14286::6.0E-10::+ |
MGAS2096_Spy0220::70::97.14286::6.0E-10::+ |
MGAS10750_Spy0200::70::97.14286::6.0E-10::+ |
M28_Spy0199 |
|
QSY00001_A_11 |
CATTAATCAAGGAAGAACTAATCAACGGTATCGGCCACATCACAGGTGGTGGCTTTATCGAGAATGTTCC |
44.29 |
29 |
104 |
MGAS6180 |
M28_Spy0025 |
phosphoribosylaminoimidazole synthetase |
purM |
SPy_0027::70::94.28571::3.3E-9::+ |
spyM18_0028::70::95.71428::1.3E-9::+ |
SpyM3_0022::70::97.14286::4.8E-10::+ |
SPs0023::70::97.14286::4.8E-10::+ |
M6_Spy0074::70::97.14286::4.8E-10::+ |
|
M28_Spy0025::70::100.0::6.9E-11::+ |
M5005_Spy_0025::70::94.28571::3.3E-9::+ |
MGAS9429_Spy0025::70::98.57143::1.9E-10::+ |
MGAS10270_Spy0026::70::98.57143::1.8E-10::+ |
MGAS2096_Spy0026::70::98.57143::1.8E-10::+ |
MGAS10750_Spy0025::70::95.71428::1.3E-9::+ |
M28_Spy0025 |
|
QSY00001_A_12 |
AAGCAGAAGATACCAAAGTGGTTCCTCTCATGTCTGAAGATAGTCCAGCGCAAACCCTTTCTAATCTTGC |
44.29 |
29 |
108 |
MGAS6180 |
M28_Spy0203 |
Jag protein |
|
SPy_0248::70::98.57143::1.5E-10::+ |
spyM18_0230::70::97.14286::4.1E-10::+ |
SpyM3_0177::70::97.14286::4.1E-10::+ |
SPs0182::70::97.14286::4.1E-10::+ |
M6_Spy0240::70::97.14286::4.1E-10::+ |
|
M28_Spy0203::70::100.0::5.7E-11::+ |
M5005_Spy_0209::70::98.57143::1.5E-10::+ |
MGAS9429_Spy0210::70::98.57143::1.5E-10::+ |
MGAS10270_Spy0209::70::97.14286::4.1E-10::+ |
|
MGAS10750_Spy0204::70::97.14286::4.1E-10::+ |
M28_Spy0203 |
|
QSY00001_A_13 |
ATTTTCGACAAGTCGAAACGCCCCTTTGTATCTTAATTATGAAAACTCCAATTATTTCTATTATCATGGG |
32.86 |
31 |
93 |
MGAS6180 |
M28_Spy0030 |
phosphoribosylaminoimidazole carboxylase catalytic subunit |
purE |
|
spyM18_0033::70::97.14286::1.2E-10::+ |
SpyM3_0027::68::98.52941::1.3E-10::+ |
SPs0028::68::98.52941::1.3E-10::+ |
M6_Spy0079::70::97.14286::1.2E-10::+ |
|
M28_Spy0030::70::100.0::1.8E-11::+ |
M5005_Spy_0030::70::98.57143::4.7E-11::+ |
|
|
|
|
M28_Spy0030 |
|
QSY00001_A_14 |
ATTTATCCAGTTTATCGCTGATGATAAAGAATGGGGACCTAAAAATGTTGTTCGTACAGGTGCTTTCCCT |
38.57 |
29 |
76 |
MGAS6180 |
M28_Spy0207 |
N-acetylneuraminate-binding protein |
|
SPy_0252::70::98.57143::2.4E-10::+ |
spyM18_0234::70::98.57143::2.4E-10::+ |
|
|
M6_Spy0244::70::98.57143::2.4E-10::+ |
|
M28_Spy0207::70::100.0::9.1E-11::+ |
M5005_Spy_0213::70::98.57143::2.4E-10::+ |
MGAS9429_Spy0214::70::98.57143::2.4E-10::+ |
MGAS10270_Spy0212::70::98.57143::2.4E-10::+ |
MGAS2096_Spy0231::70::98.57143::1.9E-10::+ |
MGAS10750_Spy0207::70::97.14286::6.2E-10::+ |
M28_Spy0207 |
|
QSY00001_A_15 |
GAAACATAACCGCAAAATGGGACATGTGACGGTGTTTAGTGATTTGCCTGATGAGGTGGAGGAGTTTTAG |
44.29 |
31 |
71 |
MGAS6180 |
M28_Spy0031 |
phosphoribosylaminoimidazole carboxylase |
purK |
|
|
|
|
|
|
M28_Spy0031::70::100.0::7.6E-11::+ |
|
|
|
|
|
M28_Spy0031 |
|
QSY00001_A_16 |
CCAATTATGCTAGGATGTTTCAAGATCCTATCTTTATGAAATCTCTTATCAATACGTTGATTATCGTTAT |
30.0 |
31 |
103 |
MGAS6180 |
M28_Spy0208 |
N-acetylneuraminate transport system permease protein |
|
|
|
|
|
|
|
M28_Spy0208::70::100.0::6.5E-11::+ |
|
|
|
|
|
M28_Spy0208 |
|
QSY00001_A_17 |
TATTAGAAATTGATTGGGAAAACGTTTCTGATGACATAGAGCCCTTAAAGATACATCGTAACTTTTATGA |
31.43 |
29 |
92 |
MGAS6180 |
M28_Spy0032 |
hypothetical protein |
|
|
|
|
|
|
|
M28_Spy0032::70::100.0::9.8E-11::+ |
|
|
|
|
|
M28_Spy0032 |
|
QSY00001_A_18 |
TTCTGACTACTGTTATTCTATGCATCTTGACCATTTTGTTTATTTTCCCATTTTATTGGATTATGACAGG |
31.43 |
33 |
55 |
MGAS9429 |
MGAS9429_Spy0216 |
N-acetylneuraminate transport system permease protein |
|
|
|
SpyM3_0183::70::100.0::4.5E-11::+ |
SPs0188::70::100.0::4.5E-11::+ |
|
|
M28_Spy0209::70::100.0::4.5E-11::+ |
|
MGAS9429_Spy0216::70::100.0::4.5E-11::+ |
|
MGAS2096_Spy0233::70::100.0::4.5E-11::+ |
|
MGAS9429_Spy0216 |
|
QSY00001_A_19 |
AACTTGATGAACTATTTAATCCGATTTATTACACAAAACGTGTTGATGATATTTTTAAGCGTTTAGGGAT |
28.57 |
32 |
89 |
MGAS6180 |
M28_Spy0033 |
adenylosuccinate lyase |
purB |
SPy_0036::70::98.57143::2.3E-10::+ |
spyM18_0037::70::98.57143::2.3E-10::+ |
SpyM3_0030::70::98.57143::2.3E-10::+ |
SPs0031::70::98.57143::2.3E-10::+ |
M6_Spy0082::70::97.14286::6.1E-10::+ |
|
M28_Spy0033::70::100.0::8.9E-11::+ |
M5005_Spy_0033::70::98.57143::2.3E-10::+ |
MGAS9429_Spy0034::70::98.57143::2.3E-10::+ |
MGAS10270_Spy0034::70::98.57143::2.3E-10::+ |
MGAS2096_Spy0035::70::98.57143::2.3E-10::+ |
MGAS10750_Spy0035::70::97.14286::6.1E-10::+ |
M28_Spy0033 |
|
QSY00001_A_2 |
GGCTTTGATAAATTAACGATTGAAATCATGACAAACGGAACAATTATTCCTGAAGATGCTTTAGGTCTAT |
32.86 |
31 |
97 |
MGAS9429 |
MGAS9429_Spy0070 |
DNA-directed RNA polymerase alpha chain |
rpoA |
SPy_0080::70::100.0::6.0E-11::+ |
spyM18_0079::70::100.0::6.0E-11::+ |
SpyM3_0066::70::100.0::6.0E-11::+ |
SPs0068::70::100.0::6.0E-11::+ |
M6_Spy0119::70::100.0::6.0E-11::+ |
|
M28_Spy0069::70::100.0::6.0E-11::+ |
M5005_Spy_0070::70::100.0::6.0E-11::+ |
MGAS9429_Spy0070::70::100.0::6.0E-11::+ |
MGAS10270_Spy0073::70::100.0::6.0E-11::+ |
MGAS2096_Spy0073::70::100.0::6.0E-11::+ |
MGAS10750_Spy0074::70::100.0::6.0E-11::+ |
MGAS9429_Spy0070 |
|
QSY00001_A_20 |
ATTTTGTGGCTTGTCTCTACTGGCCACTATGGGCATCAGTAGCCTAACTTACCTCTACTTGATTATCATG |
42.86 |
31 |
76 |
MGAS6180 |
M28_Spy0210 |
hypothetical membrane spanning protein |
|
|
|
|
|
|
|
M28_Spy0210::70::100.0::1.7E-11::+ |
|
|
|
|
|
M28_Spy0210 |
|
QSY00001_A_21 |
TTATGTTATAATAGTCCTATGGCTAGAATTTTAGACAATGATGTAATGGGAAATGAGGAGTTTTCGGATC |
32.86 |
30 |
92 |
MGAS9429 |
MGAS9429_Spy0036 |
holliday junction DNA helicase |
ruvB |
|
spyM18_0039::70::98.57143::1.9E-10::+ |
|
|
M6_Spy0084::70::98.57143::1.9E-10::+ |
|
M28_Spy0035::70::100.0::7.3E-11::+ |
|
MGAS9429_Spy0036::70::100.0::7.3E-11::+ |
|
MGAS2096_Spy0037::70::100.0::7.3E-11::+ |
MGAS10750_Spy0037::70::98.57143::1.9E-10::+ |
MGAS9429_Spy0036 |
|
QSY00001_A_22 |
TTCAATATACTATTAATGAGACTATCGGTGTCCTTGTTTCTGCTCACGGCAATATGTATGGGGTTATTAA |
35.71 |
29 |
97 |
MGAS6180 |
M28_Spy0211 |
N-acetylneuraminate lyase |
nanH |
SPy_0257::70::98.57143::1.5E-10::+ |
spyM18_0240::70::98.57143::1.5E-10::+ |
SpyM3_0185::70::98.57143::1.5E-10::+ |
SPs0190::70::98.57143::1.5E-10::+ |
M6_Spy0249::70::98.57143::1.5E-10::+ |
|
M28_Spy0211::70::100.0::5.7E-11::+ |
M5005_Spy_0217::70::98.57143::1.5E-10::+ |
MGAS9429_Spy0218::70::98.57143::1.5E-10::+ |
MGAS10270_Spy0217::70::98.57143::1.5E-10::+ |
MGAS2096_Spy0235::70::98.57143::1.5E-10::+ |
MGAS10750_Spy0212::70::98.57143::1.5E-10::+ |
M28_Spy0211 |
|
QSY00001_A_23 |
TTCAAAAACTAGTTGATAAAAATGCAAGATTTGATTTAGAGATTGCTAATCTCTTGACAGAAGATTTACA |
27.14 |
32 |
100 |
MGAS9429 |
MGAS9429_Spy0006 |
transcription-repair coupling factor |
trcF |
SPy_0008::70::100.0::1.4E-10::+ |
spyM18_0007::70::100.0::1.4E-10::+ |
SpyM3_0006::70::100.0::1.4E-10::+ |
SPs0006::70::100.0::1.4E-10::+ |
M6_Spy0006::70::100.0::1.4E-10::+ |
|
M28_Spy0006::70::100.0::1.4E-10::+ |
M5005_Spy_0006::70::100.0::1.4E-10::+ |
MGAS9429_Spy0006::70::100.0::1.4E-10::+ |
MGAS10270_Spy0006::70::100.0::1.4E-10::+ |
MGAS2096_Spy0006::70::100.0::1.4E-10::+ |
MGAS10750_Spy0006::70::100.0::1.4E-10::+ |
MGAS9429_Spy0006 |
|
QSY00001_A_24 |
ATTTAAAAGTCATGATTTTCGAAAATCAGCTAGTAATGGAAAAGGGTATCAACCCATGTTATTTGGAATA |
30.0 |
32 |
111 |
MGAS10750 |
MGAS10750_Spy0098 |
ComG operon protein 6 |
comYD |
SPy_0106::70::100.0::2.6E-11::+ |
spyM18_0108::70::98.57143::6.5E-11::+ |
SpyM3_0083::70::98.57143::6.5E-11::+ |
SPs0084::70::98.57143::6.5E-11::+ |
M6_Spy0139::70::98.57143::6.5E-11::+ |
|
M28_Spy0089::70::100.0::2.6E-11::+ |
M5005_Spy_0091::70::100.0::2.6E-11::+ |
MGAS9429_Spy0092::70::98.57143::6.5E-11::+ |
MGAS10270_Spy0093::70::98.57143::6.5E-11::+ |
MGAS2096_Spy0094::70::98.57143::6.5E-11::+ |
MGAS10750_Spy0098::70::100.0::2.6E-11::+ |
MGAS10750_Spy0098 |
|
QSY00001_A_3 |
ATAATAACAAACAAATTGTCCTAACAAGTGACCGTACACCAGATCATCTCAATGATTTAGAAGATCGATT |
32.86 |
30 |
86 |
MGAS6180 |
M28_Spy0001 |
chromosomal replication initiation protein |
dnaA |
SPy_0002::70::98.57143::2.4E-10::+ |
spyM18_0001::70::98.57143::2.4E-10::+ |
SpyM3_0001::70::98.57143::2.4E-10::+ |
SPs0001::70::98.57143::2.4E-10::+ |
M6_Spy0001::70::98.57143::2.4E-10::+ |
|
M28_Spy0001::70::100.0::9.3E-11::+ |
M5005_Spy_0001::70::98.57143::2.4E-10::+ |
MGAS9429_Spy0001::70::98.57143::2.4E-10::+ |
MGAS10270_Spy0001::70::98.57143::2.4E-10::+ |
MGAS2096_Spy0001::70::98.57143::2.4E-10::+ |
MGAS10750_Spy0001::70::98.57143::2.4E-10::+ |
M28_Spy0001 |
|
QSY00001_A_4 |
TATTTTGAACATTTTATGGCTGCCAATCAGGCTTATGTGGCCTTGCATGGGACAGCTCATCTGCCCTTAA |
44.29 |
30 |
88 |
MGAS315 |
SpyM3_0168 |
hypothetical protein |
|
SPy_0237::70::98.57143::5.7E-11::+ |
spyM18_0221::70::98.57143::5.7E-11::+ |
SpyM3_0168::70::100.0::2.2E-11::+ |
SPs0175::70::100.0::2.2E-11::+ |
M6_Spy0232::70::98.57143::5.7E-11::+ |
|
M28_Spy0195::70::100.0::2.2E-11::+ |
M5005_Spy_0201::70::98.57143::5.7E-11::+ |
MGAS9429_Spy0202::70::98.57143::5.7E-11::+ |
MGAS10270_Spy0200::70::98.57143::5.7E-11::+ |
MGAS2096_Spy0214::70::98.57143::7.0E-11::+ |
MGAS10750_Spy0196::70::97.14286::1.4E-10::+ |
SpyM3_0168 |
|
QSY00001_A_5 |
GATGATGGATAATATTGTAAAAAAAATAGAAGCATTTCTTGCTTTTTCTGATAAAAAATTAGCAGAGCTG |
27.14 |
34 |
111 |
MGAS6180 |
M28_Spy0009 |
hypothetical protein |
|
|
|
|
SPs0009::70::98.57143::2.3E-10::+ |
M6_Spy0009::70::97.14286::5.8E-10::+ |
|
M28_Spy0009::70::100.0::8.9E-11::+ |
M5005_Spy_0009::70::98.57143::2.3E-10::+ |
MGAS9429_Spy0009::70::98.57143::2.3E-10::+ |
MGAS10270_Spy0009::70::98.57143::2.3E-10::+ |
MGAS2096_Spy0009::70::98.57143::2.3E-10::+ |
MGAS10750_Spy0009::70::98.57143::2.3E-10::+ |
M28_Spy0009 |
|