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Platform GPL6618 Query DataSets for GPL6618
Status Public on May 14, 2008
Title Affymetrix non-commercial Mouse Tiling 1.0 Array 6
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol Affymetrix standard array manufacture protocol. Please refer to http://www.affymetrix.com/technology/manufacturing/index.affx for details.
Support glass
Coating unknown
 
 
Submission date Mar 19, 2008
Last update date May 14, 2008
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (4) GSM276311, GSM276327, GSM276343, GSM276359
Series (1)
GSE10834 Global transcriptional activity in pluripotent embryonic stem cells.

Data table header descriptions
ID chip_coord_genomic_coord
CHIP_COORD chip coordinate
SEQUENCE probe sequence
RANGE_GB GenBank Accession number of the chromosome upon which probes are mapped
RANGE_START start position of mapped probe relative to RANGE_GB
RANGE_END end position of mapped probe relative to RANGE_GB
RANGE_STRAND chromosomal strand

Data table
ID CHIP_COORD SEQUENCE RANGE_GB RANGE_START RANGE_END RANGE_STRAND
x1324_y749_chr1_3057800 x1324_y749 CAGACAGCACAAGCGGCCCTGAGAG NC_000067.1 3057800 3057824 -
x1010_y2317_chr1_3057856 x1010_y2317 CTAACTATGCCCCTAACCAAGATTA NC_000067.1 3057856 3057880 -
x1158_y1455_chr1_3057861 x1158_y1455 TATGCCCCTAACCAAGATTATACAA NC_000067.1 3057861 3057885 -
x98_y1989_chr1_3057872 x98_y1989 TCTTGGGGCCCTTGTATAATCTTGG NC_000067.1 3057872 3057896 +
x2429_y1793_chr1_3057873 x2429_y1793 TTCTTGGGGCCCTTGTATAATCTTG NC_000067.1 3057873 3057897 +
x2243_y2147_chr1_3057929 x2243_y2147 AAGCAGCTGAGAGAATTTTGGGACC NC_000067.1 3057929 3057953 -
x1736_y657_chr1_3057932 x1736_y657 TCAGGTCCCAAAATTCTCTCAGCTG NC_000067.1 3057932 3057956 +
x110_y1125_chr1_3057936 x110_y1125 TTCCTCAGGTCCCAAAATTCTCTCA NC_000067.1 3057936 3057960 +
x2376_y1185_chr1_3058141 x2376_y1185 ACTCCAGCTCCAAGATTGGTGCCGA NC_000067.1 3058141 3058165 -
x2317_y943_chr1_3058172 x2317_y943 TTGGCCCAAGTTAGAAGTAGACATC NC_000067.1 3058172 3058196 -
x1790_y1467_chr1_3058172 x1790_y1467 GATGTCTACTTCTAACTTGGGCCAA NC_000067.1 3058172 3058196 +
x1116_y305_chr1_3058233 x1116_y305 ACCCCTGATTATTATATGCCTCAAT NC_000067.1 3058233 3058257 -
x1117_y305_chr1_3058233 x1117_y305 ACCCCTGATTATTATATGCCTCAAT NC_000067.1 3058233 3058257 -
x1648_y811_chr1_3058235 x1648_y811 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x2215_y1581_chr1_3058265 x2215_y1581 GGGCTCAAATTCACCTGTGTTAACT NC_000067.1 3058265 3058289 +
x641_y2389_chr1_3058325 x641_y2389 AGTGTCCAGACTTTTACAAGGCCTA NC_000067.1 3058325 3058349 -
x731_y2389_chr1_3058325 x731_y2389 AGTGTCCAGACTTTTACAAGGCCTA NC_000067.1 3058325 3058349 -
x531_y2119_chr1_3058328 x531_y2119 CATTAGGCCTTGTAAAAGTCTGGAC NC_000067.1 3058328 3058352 +
x267_y2455_chr1_3058336 x267_y2455 GGAGTCACCATTAGGCCTTGTAAAA NC_000067.1 3058336 3058360 +
x281_y1571_chr1_3058356 x281_y1571 ACTCCTACAGTGGTTGACACCGACT NC_000067.1 3058356 3058380 -

Total number of rows: 3286485

Table truncated, full table size 305232 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6618.txt.gz 82.9 Mb (ftp)(http) TXT

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