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Platform GPL6620 Query DataSets for GPL6620
Status Public on May 14, 2008
Title Affymetrix non-commercial Mouse Tiling 1.0 Array 8
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol Affymetrix standard array manufacture protocol. Please refer to http://www.affymetrix.com/technology/manufacturing/index.affx for details.
Support glass
Coating unknown
 
 
Submission date Mar 19, 2008
Last update date May 14, 2008
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (4) GSM276313, GSM276329, GSM276345, GSM276361
Series (1)
GSE10834 Global transcriptional activity in pluripotent embryonic stem cells.

Data table header descriptions
ID chip_coord_genomic_coord
CHIP_COORD chip coordinate
SEQUENCE probe sequence
RANGE_GB GenBank Accession number of the chromosome upon which probes are mapped
RANGE_START start position of mapped probe relative to RANGE_GB
RANGE_END end position of mapped probe relative to RANGE_GB
RANGE_STRAND chromosomal strand

Data table
ID CHIP_COORD SEQUENCE RANGE_GB RANGE_START RANGE_END RANGE_STRAND
x217_y1199_chr1_3057738 x217_y1199 GTGGTTAAGGCAATTTCGCTGCAGA NC_000067.1 3057738 3057762 -
x1024_y2195_chr1_3057869 x1024_y2195 TAACCAAGATTATACAAGGGCCCCA NC_000067.1 3057869 3057893 -
x1889_y2149_chr1_3057929 x1889_y2149 AAGCAGCTGAGAGAATTTTGGGACC NC_000067.1 3057929 3057953 -
x2358_y1125_chr1_3057936 x2358_y1125 TTCCTCAGGTCCCAAAATTCTCTCA NC_000067.1 3057936 3057960 +
x1242_y2207_chr1_3057959 x1242_y2207 AAAGTGAGGGTCTGTTAGTTCGACA NC_000067.1 3057959 3057983 -
x1793_y1189_chr1_3058141 x1793_y1189 ACTCCAGCTCCAAGATTGGTGCCGA NC_000067.1 3058141 3058165 -
x1657_y841_chr1_3058144 x1657_y841 GGCTCGGCACCAATCTTGGAGCTGG NC_000067.1 3058144 3058168 +
x133_y945_chr1_3058172 x133_y945 TTGGCCCAAGTTAGAAGTAGACATC NC_000067.1 3058172 3058196 -
x979_y1465_chr1_3058172 x979_y1465 GATGTCTACTTCTAACTTGGGCCAA NC_000067.1 3058172 3058196 +
x2066_y1915_chr1_3058226 x2066_y1915 CATATAATAATCAGGGGTGCCCCAG NC_000067.1 3058226 3058250 +
x680_y405_chr1_3058229 x680_y405 GGGCACCCCTGATTATTATATGCCT NC_000067.1 3058229 3058253 -
x431_y305_chr1_3058233 x431_y305 ACCCCTGATTATTATATGCCTCAAT NC_000067.1 3058233 3058257 -
x2371_y809_chr1_3058235 x2371_y809 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x2449_y809_chr1_3058235 x2449_y809 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x521_y1269_chr1_3058258 x521_y1269 AATTCACCTGTGTTAACTGCTGTTA NC_000067.1 3058258 3058282 +
x892_y2471_chr1_3058326 x892_y2471 GTGTCCAGACTTTTACAAGGCCTAA NC_000067.1 3058326 3058350 -
x2469_y1591_chr1_3058332 x2469_y1591 TCACCATTAGGCCTTGTAAAAGTCT NC_000067.1 3058332 3058356 +
x1891_y1655_chr1_3058362 x1891_y1655 CATGGTAGTCGGTGTCAACCACTGT NC_000067.1 3058362 3058386 +
x1927_y1999_chr1_3058387 x1927_y1999 GGGAGATAAAAATCTTAGTCACCGC NC_000067.1 3058387 3058411 -
x1208_y1793_chr1_3058455 x1208_y1793 CGAATAGTGGGAGTGGTAAGGCTTG NC_000067.1 3058455 3058479 +

Total number of rows: 3379973

Table truncated, full table size 311980 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6620.txt.gz 85.1 Mb (ftp)(http) TXT

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