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Platform GPL6622 Query DataSets for GPL6622
Status Public on May 14, 2008
Title Affymetrix non-commercial Mouse Tiling 1.0 Array 10
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol Affymetrix standard array manufacture protocol. Please refer to http://www.affymetrix.com/technology/manufacturing/index.affx for details.
Support glass
Coating unknown
 
 
Submission date Mar 19, 2008
Last update date May 14, 2008
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (4) GSM276315, GSM276331, GSM276347, GSM276363
Series (1)
GSE10834 Global transcriptional activity in pluripotent embryonic stem cells.

Data table header descriptions
ID chip_coord_genomic_coord
CHIP_COORD chip coordinate
SEQUENCE probe sequence
RANGE_GB GenBank Accession number of the chromosome upon which probes are mapped
RANGE_START start position of mapped probe relative to RANGE_GB
RANGE_END end position of mapped probe relative to RANGE_GB
RANGE_STRAND chromosomal strand

Data table
ID CHIP_COORD SEQUENCE RANGE_GB RANGE_START RANGE_END RANGE_STRAND
x1424_y267_chr1_3057708 x1424_y267 AGACAGCCTCCTGGACTGCTGATAA NC_000067.1 3057708 3057732 -
x669_y1157_chr1_3057738 x669_y1157 GTGGTTAAGGCAATTTCGCTGCAGA NC_000067.1 3057738 3057762 -
x1489_y2537_chr1_3057851 x1489_y2537 GGGCACTAACTATGCCCCTAACCAA NC_000067.1 3057851 3057875 -
x252_y1620_chr1_3057859 x252_y1620 GTATAATCTTGGTTAGGGGCATAGT NC_000067.1 3057859 3057883 +
x1024_y1620_chr1_3057859 x1024_y1620 GTATAATCTTGGTTAGGGGCATAGT NC_000067.1 3057859 3057883 +
x1411_y1773_chr1_3057873 x1411_y1773 TTCTTGGGGCCCTTGTATAATCTTG NC_000067.1 3057873 3057897 +
x2517_y291_chr1_3057921 x2517_y291 AATTCTCTCAGCTGCTTCCTGCAAT NC_000067.1 3057921 3057945 +
x601_y2129_chr1_3057929 x601_y2129 AAGCAGCTGAGAGAATTTTGGGACC NC_000067.1 3057929 3057953 -
x2333_y1599_chr1_3057951 x2333_y1599 TAACAGACCCTCACTTTCCTCAGGT NC_000067.1 3057951 3057975 +
x657_y1149_chr1_3058141 x657_y1149 ACTCCAGCTCCAAGATTGGTGCCGA NC_000067.1 3058141 3058165 -
x565_y815_chr1_3058144 x565_y815 GGCTCGGCACCAATCTTGGAGCTGG NC_000067.1 3058144 3058168 +
x1294_y915_chr1_3058172 x1294_y915 TTGGCCCAAGTTAGAAGTAGACATC NC_000067.1 3058172 3058196 -
x1355_y1437_chr1_3058172 x1355_y1437 GATGTCTACTTCTAACTTGGGCCAA NC_000067.1 3058172 3058196 +
x1455_y1437_chr1_3058172 x1455_y1437 GATGTCTACTTCTAACTTGGGCCAA NC_000067.1 3058172 3058196 +
x1457_y1437_chr1_3058172 x1457_y1437 GATGTCTACTTCTAACTTGGGCCAA NC_000067.1 3058172 3058196 +
x518_y291_chr1_3058233 x518_y291 ACCCCTGATTATTATATGCCTCAAT NC_000067.1 3058233 3058257 -
x1046_y785_chr1_3058235 x1046_y785 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x1047_y785_chr1_3058235 x1047_y785 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x1048_y785_chr1_3058235 x1048_y785 TAATTGAGGCATATAATAATCAGGG NC_000067.1 3058235 3058259 +
x1073_y2125_chr1_3058266 x1073_y2125 GTTAACACAGGTGAATTTGAGCCCC NC_000067.1 3058266 3058290 -

Total number of rows: 3266664

Table truncated, full table size 303722 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6622.txt.gz 82.3 Mb (ftp)(http) TXT

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