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Platform GPL6743 Query DataSets for GPL6743
Status Public on Jul 30, 2009
Title University of Minnesota Human miRNA version 2
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Homo sapiens
Manufacturer Biomedical Genomics Center Microarray Facility at the University of Minnesota
Manufacture protocol A miRNA probe set was purchased from Invitrogen, which was designed based on the Sanger miRBase Sequence Database, Release 9.0. The set contains approximately 1,140 oligonucleotides of 34 to 44 nt long as probes. They are complementary to C. elegans, Drosophila, zebrafish, mouse, rat, and human miRNAs, and also include a number of internal and negative control probes. The oligonucleotides were dissolved in 3 x SSC and quadruply printed on CorningĀ® GAPSTM II coated slides using a BioRobotics Microgrid II spotter
 
 
Submission date Apr 15, 2008
Last update date Jul 30, 2009
Contact name Xiaoxiao Zhang
E-mail(s) zhang688@umn.edu
Organization name University of Minnesota
Street address 312 Church St. SE
City Minneapolis
ZIP/Postal code 55455
Country USA
 
Samples (3) GSM281713, GSM281714, GSM281715
Series (1)
GSE11176 Estimation of miRNAs

Data table header descriptions
ID
ORF from Invitrogen
SEQUENCE

Data table
ID ORF SEQUENCE
1 hsa-let-7a AACTATACAACCTACTACCTCAAACTATACAACCTACTACCTCA
2 hsa-let-7b AACCACACAACCTACTACCTCAAACCACACAACCTACTACCTCA
3 hsa-let-7c AACCATACAACCTACTACCTCAAACCATACAACCTACTACCTCA
4 hsa-let-7d ACTATGCAACCTACTACCTCTACTATGCAACCTACTACCTCT
5 hsa-let-7e ACTATACAACCTCCTACCTCAACTATACAACCTCCTACCTCA
6 hsa-let-7f AACTATACAATCTACTACCTCAAACTATACAATCTACTACCTCA
7 hsa-let-7g ACTGTACAAACTACTACCTCAACTGTACAAACTACTACCTCA
8 hsa-let-7i ACAGCACAAACTACTACCTCAACAGCACAAACTACTACCTCA
9 hsa-miR-1 TACATACTTCTTTACATTCCATACATACTTCTTTACATTCCA
10 hsa-miR-100 CACAAGTTCGGATCTACGGGTCACAAGTTCGGATCTACGGGT
11 hsa-miR-101 CTTCAGTTATCACAGTACTGTACTTCAGTTATCACAGTACTGTA
12 hsa-miR-103 TCATAGCCCTGTACAATGCTGTCATAGCCCTGTACAATGCTG
13 hsa-miR-105 ACAGGAGTCTGAGCATTTGAACAGGAGTCTGAGCATTTGA
14 hsa-miR-106a CTACCTGCACTGTAAGCACTTTCTACCTGCACTGTAAGCACTTT
15 hsa-miR-106b ATCTGCACTGTCAGCACTTTAATCTGCACTGTCAGCACTTTA
16 hsa-miR-107 TGATAGCCCTGTACAATGCTGTGATAGCCCTGTACAATGCTG
17 hsa-miR-10a CACAAATTCGGATCTACAGGGTCACAAATTCGGATCTACAGGGT
18 hsa-miR-10b ACAAATTCGGTTCTACAGGGTAACAAATTCGGTTCTACAGGGTA
19 hsa-miR-122a ACAAACACCATTGTCACACTCCACAAACACCATTGTCACACTCC
20 hsa-miR-124a TGGCATTCACCGCGTGCCTTAATGGCATTCACCGCGTGCCTTAA

Total number of rows: 467

Table truncated, full table size 27 Kbytes.




Download family Format
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Supplementary data files not provided

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