NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL7253 Query DataSets for GPL7253
Status Public on Nov 30, 2008
Title Neurospora crassa LGVII 44K tiling array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Neurospora crassa
Manufacturer Agilent
Manufacture protocol Uploaded oligo sequences for custom array synthesis
Support glass
Coating unknown
 
Description each slide contains 4 x 44K subarrays
 
Web link http://www.agilent.com
Contributor(s) Lewis ZA, Stiffler N, Selker EU
Submission date Sep 05, 2008
Last update date Nov 30, 2008
Contact name Zachary A Lewis
E-mail(s) zlewis@uoregon.edu
Phone 541-346-5197
Fax 541-346-5198
URL http://www.molbio.uoregon.edu
Organization name University of Oregon
Department Institute of Molecular Biology
Lab Eric Selker Laboratory
Street address 1370 Franklin Blvd
City Eugene
State/province OR
ZIP/Postal code 97403-1229
Country USA
 
Samples (13) GSM318577, GSM318578, GSM318582, GSM318585, GSM318587, GSM318592 
Series (1)
GSE12690 Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa

Data table header descriptions
ID
SEQUENCE Oligo sequence
RANGE_START
RANGE_END
RANGE_GB
SPOT_ID
RANGE_STRAND

Data table
ID SEQUENCE RANGE_START RANGE_END RANGE_GB SPOT_ID RANGE_STRAND
NC100+and-_1 TAACCTAACCTAACCCTACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAA --unknown +
NC100+and-_2 GTTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA --unknown -
NC100+and-_3 ACATATATTCAATTAGACACATATTATTGTCACAACGTTCAAATACCCTCTCAACGGT 350303 350246 AABX020002510.1 +
NC100+and-_4 AGTTAAAGCGAATATTCTATTCCTCTATGTCCATTTATTCTAGAAGGCCCTTTTCGTCCT 18216 18275 AABX020002510.1 -
NC100+and-_5 ACGAATTCGAAAGGATTAATAAATATCGGAAGAATAATAAAGGATATTAGGAATACTTCG 18167 18108 AABX020002510.1 +
NC100+and-_6 GCTTCGGGGTATTCGTTGTAGAAAACCCGGATTATATTAGGGGCTATAAATATATTAGCG 18008 18067 AABX020002510.1 -
NC100+and-_7 AGGCAGCAATAGAGAGGAAGCAGAAGGAAAAGGAGAAAGAGGTAGAGTAGAGAATTC 17990 17934 AABX020002510.1 +
NC100+and-_8 AGAAATCCTTATTAAACGAGCGGTTTATTCTTAAAAAGTCCTTACTACCGCCGCTAGT 17845 17902 AABX020002510.1 -
NC100+and-_9 TATACTTAGTACTAGCGTATAGCAGCTTCTAAGACTGCCGTACACTATTATTACCGCCGG 17767 17708 AABX020002510.1 +
NC100+and-_10 ATGGTCTGGCAGACCCGCGGCAGGCAGCGTTCCAACCAATCAACTA 967680 967641 AABX020002510.1 -
NC100+and-_11 TTTCTCCTTCGTGCAATTACGCATAATCACATCTACTATCTACCCTTTGCCCGT 30481 30428 AABX020002510.1 +
NC100+and-_12 AGAAAGCAAACTATCGCGGTCGGCACGGGCTAGTAGAGGTAGTTA 17454 17498 AABX020002510.1 -
NC100+and-_13 ACTTCAATTTTTAACGGCCGGCAGCACTTAATCATCTCCTTTTCGTTATCGC 17400 17349 AABX020002510.1 +
NC100+and-_14 CTTTCAGCTCGTGTGTGCTCTTCGAACAAAACTTCTTGCTGACTCGATTTT 17249 17299 AABX020002510.1 -
NC100+and-_15 AGCGCCATCAAAACGTCCTGTTCTGCCAAAAACTCGACAAAATCTC 17202 17157 AABX020002510.1 +
NC100+and-_16 CTTGAACGAGGGGGATGTGCATGATGTTATCAACCTGTTCCAGGTTAC 17056 17103 AABX020002510.1 -
NC100+and-_17 CACTCAACACGTTGTTGATATACGGATCACATCTCGTCCCCAAGAGGT 16997 16950 AABX020002510.1 +
NC100+and-_18 CACGTATCAACCCACGACCGGCTCTGGTCTAACTTACCCTTCATG 16832 16876 AABX020002510.1 -
NC100+and-_19 TTGTGGAGATTCCAAATGTTGAGATCGCCAACTTGAGGACCTTCGG 16782 16737 AABX020002510.1 +
NC100+and-_20 CAACAAGCTGCCCGCATCCTCACCGACGAATTTACCATCCCTATC 16637 16681 AABX020002510.1 -

Total number of rows: 43991

Table truncated, full table size 4093 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap
External link. Please review our privacy policy.