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Platform GPL7284 Query DataSets for GPL7284
Status Public on Dec 01, 2008
Title BTI DNA microarray for Actinosynema pretiosum
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Actinosynnema pretiosum
Manufacturer Bioprocessing Technology Institute, Singapore
Manufacture protocol 1.PCR products were obtained from PCR reactions on genomic DNA of A. pretiosum. The primers were designed based on DNA sequences, AF453501 and U33059 as discussed in Yu et. al., 2002, PNAS, 99:7968. The DNA were arrayed in Abgene 384-well plates. Each well contains 100-150 ng/ul of DNA.
2. Rearray 10 ┬ÁL into 384-well, Abgene 384-well microarray plates (AB-1056/w).
3. Print arrays using Biorad chipwriter pro, after print run is completed, let slides dry through passive evaporation in the arrayer.
Support glass
Coating poly-L-lysine
 
 
Contributor(s) Chang A, Nissom PM
Submission date Sep 11, 2008
Last update date Oct 24, 2011
Contact name Peter Nissom
E-mail(s) pnissom@gmail.com
Organization name Bioprocessing Technology Institute
Street address 20 Biopolis Way
City Singapore
ZIP/Postal code 138668
Country Singapore
 
Samples (24) GSM319879, GSM319880, GSM319881, GSM319882, GSM319883, GSM319884 
Series (1)
GSE12739 Transcriptional profile asm gene cluster of high Ansamitocin P3 producing mutants derived from A. pretiosum

Data table header descriptions
ID
GB_ACC GenBank Accession number
SPOT_ID

Data table
ID GB_ACC SPOT_ID
16S rRNA_1 AB122775 GenBank accession: AB122775; 16S rRNA
16S rRNA_2 AB122775 GenBank accession: AB122775; 16S rRNA
16S rRNA_3 AB122775 GenBank accession: AB122775; 16S rRNA
16S rRNA_4 AB122775 GenBank accession: AB122775; 16S rRNA
aroF1 AF056968 GenBank accession: AF056968; aroF1
aroF2 AF056968 GenBank accession: AF056968; aroF2
asm1 AF453501 GenBank accession: AF453501; asm1
asm10 AF453501 GenBank accession: AF453501; asm10
asm12 AF453501 GenBank accession: AF453501; asm12
asm13 AF453501 GenBank accession: AF453501; asm13
asm14 AF453501 GenBank accession: AF453501; asm14
asm16 AF453501 GenBank accession: AF453501; asm16
asm17 AF453501 GenBank accession: AF453501; asm17
asm19 AF453501 GenBank accession: AF453501; asm19
asm2 AF453501 GenBank accession: AF453501; asm2
asm20 AF453501 GenBank accession: AF453501; asm20
asm21_1 AF453501 GenBank accession: AF453501; asm21
asm21_2 AF453501 GenBank accession: AF453501; asm21
asm21_3 AF453501 GenBank accession: AF453501; asm21
asm22 AF453501 GenBank accession: AF453501; asm22

Total number of rows: 69

Table truncated, full table size 3 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL7284_array_list.txt.gz 3.8 Kb (ftp)(http) TXT
GPL7284_primer_sequences.txt.gz 2.6 Kb (ftp)(http) TXT

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