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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 19, 2009 |
| Title |
Riken_Human_QPCR |
| Technology type |
other |
| Distribution |
non-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Not Applicable |
| Manufacture protocol |
QPCR
|
| |
|
| |
|
| Submission date |
Apr 02, 2009 |
| Last update date |
Apr 19, 2009 |
| Contact name |
Piero Carninci |
| Organization name |
RIKEN
|
| Department |
Center for Life Science Technologies
|
| Lab |
Division of Genomic Technologies(DGT)
|
| Street address |
1-7-22,Suehiro-cho,Tsurumi-ku
|
| City |
Yokohama |
| ZIP/Postal code |
230-0045 |
| Country |
Japan |
| |
|
| Samples (10)
|
GSM389231, GSM389232, GSM389233, GSM389234, GSM389235, GSM389236
|
| Series (1) |
| GSE15528 |
The time-series gene expression data in PMA stimulated THP-1 |
|
| Data table header descriptions |
| ID |
|
| ORF |
|
| plate_id |
|
| primer_name |
|
| Entrez_gene_id |
|
| Fwd Primer Sequence |
|
| Reverse Primer Sequence |
|
| position |
|
| SPOT_ID |
|
| Data table |
| ID |
ORF |
plate_id |
primer_name |
Entrez_gene_id |
Fwd Primer Sequence |
Reverse Primer Sequence |
position |
SPOT_ID |
| 1 |
GAPDH |
S30069GU |
|
|
gtcagtggtggacctgacct |
tcgctgttgaagtcagagga |
|
|
| 2 |
BRCA2 |
S30069GU |
TFh0001 |
675 |
CAGCCACCAAGGAGTTGTG |
AATGCAAGTTCTTCGTCAGC |
chr13:31870545..31870687 |
|
| 3 |
CAMK4 |
S30069GU |
TFh0002 |
814 |
TGAGCTGATGAAGGTGCAAG |
AGGCCCTCCTCTAGTTCCAG |
chr5:110847817..110847948 |
|
| 4 |
AEBP1 |
S30069GU |
TFh0003 |
165 |
GTCACATCACCCATCAGCAC |
AGCAGGAGCCTCTACACAGC |
chr7:44120458..44120587 |
|
| 5 |
AIRE |
S30069GU |
TFh0004 |
326 |
GTGCTGAGAAGGACACCTCC |
AATTTCCAGGCACATGATGG |
chr21:44542075..44542216 |
|
| 6 |
ATBF1 |
S30069GU |
TFh0005 |
463 |
TCATTGTTCCAAAGGTGCAG |
TGAAGCACCATCTCTTGCAG |
chr16:71379168..71379309 |
|
| 7 |
RUNX3 |
S30069GU |
TFh0006 |
864 |
CTCCGTTCCTAACTGTTGGC |
TGCGTTGAGCTGGTAAAGTG |
chr1:25100430..25100567 |
|
| 8 |
CHES1 |
S30069GU |
TFh0007 |
1112 |
AGGTGGACGTTGGACTGTTC |
CCAATCTTCAGGCTTATGGC |
chr14:88697710..88697857 |
|
| 9 |
ALX3 |
S30069GU |
TFh0008 |
257 |
TACTCCATCCATGGCTTTCC |
ACGTGGTCCAGTTCAGAAGG |
chr1:110404880..110405018 |
|
| 10 |
CALR |
S30069GU |
TFh0009 |
811 |
ATTCTCCTTCAGCCCTCACC |
ATCTCAGGCCTGTGGCTTC |
chr19:12915942..12916076 |
|
| 11 |
ADPRT |
S30069GU |
TFh0010 |
142 |
CCCTGTGGTAATTGGGAGAG |
TCCTTTCTGAGGTGGTTTAGTACAG |
chr1:224615657..224615794 |
|
| 12 |
APC |
S30069GU |
TFh0011 |
324 |
AGCAGCTCAAGCAAACACAG |
GGAGTTGGGATCTGAGATGG |
chr5:112207483..112207613 |
|
| 13 |
BAD |
S30069GU |
TFh0012 |
572 |
AGTGACCTTCGCTCCACATC |
CTCCCTCCAAAGGAGACAGC |
chr11:63794131..63794261 |
|
| 14 |
BAI3 |
S30069GU |
TFh0013 |
577 |
AGGACCTTCATGTGCCAAAC |
TTACAAATCCATTCCACGGG |
chr6:70155608..70155739 |
|
| 15 |
CDX4 |
S30069GU |
TFh0014 |
1046 |
GCAGAGCCAAGGAGAGAAAG |
TTGAAATCCACGAACAGCAG |
chrX:72590962..72591110 |
|
| 16 |
CUTL1 |
S30069GU |
TFh0015 |
1523 |
CAGGCCATAGAGGTGCTGAC |
AAGCTGTGAGATCTGGCTGG |
chr7:101608472..101608621 |
|
| 17 |
BARD1 |
S30069GU |
TFh0016 |
580 |
ACACCATCCAAAGGACAACC |
GCTGATCAGAATCGGGTCTC |
chr2:215301788..215301927 |
|
| 18 |
CBL |
S30069GU |
TFh0017 |
867 |
ATCCTCCGGGAATTTGTTTC |
GGAACTCCTGCCCTTCTAGG |
chr11:118675651..118675784 |
|
| 19 |
APBB2 |
S30069GU |
TFh0018 |
323 |
AAACAGAAACGCCCTGTCAC |
ATCAGCAACTGGATGGAAGG |
chr4:40512769..40512898 |
|
| 20 |
ASCL1 |
S30069GU |
TFh0019 |
429 |
GAGCAACTGGGACCTGAGTC |
CAAGAACTTTCAGCTGTGCG |
chr12:101877504..101877635 |
|
Total number of rows: 2396
Table truncated, full table size 233 Kbytes.
| Supplementary data files not provided |
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