NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL8633 Query DataSets for GPL8633
Status Public on Jun 01, 2010
Title Affymetrix S. cerevisiae TAG4 101K array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Affymetrix
Manufacture protocol http://www.affymetrix.com/index.affx
 
Description Affymetrix supplied library file (GenFlex_Tag_16K_v2.cdf) contains information about probe sequences but not identity. We used this library file in conjunction with the annotations provided in the platform data table to analyze the array data.
 
Submission date Jun 02, 2009
Last update date Aug 24, 2015
Contact name William Jo
E-mail(s) williamjo@berkeley.edu
Organization name UC Berkeley
Street address 119 Morgan Hall
City Berkeley
State/province CA
ZIP/Postal code 94270
Country USA
 
Samples (22) GSM2202346, GSM2202348, GSM2202350, GSM2202352, GSM2202354, GSM2202356 
Series (2)
GSE83398 Functional profiling of formaldehyde in yeast
GSE122458 Mithramycin A chemogenomic profile
Relations
Alternative to GPL17030
Alternative to GPL20845

Data table header descriptions
ID
X X coordinate in array
Y Y coordinate in array
SEQUENCE Oligo sequence
ORF ORF name
up.dntag Up or Down tag
tag.type Tag Type
X.Y.1LQ XY
oligo.1LQ Oligo
QULIFIER.1LQ Qualifier
DESTYPE.1LQ Type
UNIT.1LQ Unit
SPOT_ID

Data table
ID X Y SEQUENCE ORF up.dntag tag.type X.Y.1LQ oligo.1LQ QULIFIER.1LQ DESTYPE.1LQ UNIT.1LQ SPOT_ID
0_0 0 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -3 0 default_at
1_0 1 0 AGGACTTGCCATCGTAGAACTGCTG default_st 3 0 default_st
2_0 2 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -3 0 default_at
3_0 3 0 AGGACTTGCCATCGTAGAACTGCTG default_st 3 0 default_st
4_0 4 0 default_st 0 0 default_st
5_0 5 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
6_0 6 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
7_0 7 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
8_0 8 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
9_0 9 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
10_0 10 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
11_0 11 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
12_0 12 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
13_0 13 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
14_0 14 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
15_0 15 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
16_0 16 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
17_0 17 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at
18_0 18 0 AGGACTTGCCATCGTAGAACTGCTG default_st 6 0 default_st
19_0 19 0 CAGCAGTTCTACGATGGCAAGTCCT default_at -6 0 default_at

Total number of rows: 101124

Table truncated, full table size 10518 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL8633_GenFlex_Tag_16K_v2.cdf.gz 3.3 Mb (ftp)(http) CDF

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap