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Platform GPL8948 Query DataSets for GPL8948
Status Public on Jul 18, 2011
Title IMPPC Homo sapiens 6.8K
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Febit
Manufacture protocol see manufacturers web page (http://www.febit.com/)
 
 
Submission date Jul 29, 2009
Last update date Jul 18, 2011
Contact name Lauro Sumoy
E-mail(s) lsumoy@igtp.cat
Organization name IGTP
Department High Content Genomics and Bioinformatics
Street address Ctra. Can Ruti, Camí de les escoles s/n
City Badalona
State/province Barcelona
ZIP/Postal code 08916
Country Spain
 
Samples (16) GSM434648, GSM434649, GSM434650, GSM434651, GSM434652, GSM434653 
Series (1)
GSE17403 Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis

Data table header descriptions
ID
CHANNEL feature channel
COLUMN feature column
ROW feature row
NAME feature name
ID_FEAT feature ID
GB_ACC GenBank accession number
SPOT_ID
SEQUENCES probe sequence
SYMBOL gene symbol
DESCRIPTION gene description

Data table
ID CHANNEL COLUMN ROW NAME ID_FEAT GB_ACC SPOT_ID SEQUENCES SYMBOL DESCRIPTION
1 1 1 1 F2.1-PM-control F2.1-PM-control --F2.1-PM-control GCAGTGCTGCCATAACCATGAGTGA
2 1 1 2 F2.1-MM-control F2.1-MM-control --F2.1-MM-control GCAGTGCTGCCAAAACCATGAGTGA
3 1 1 3 Blank-control Blank-control --Blank-control
4 1 1 4 363-NM_007193.3-PM ANXA10 NM_007193.3 GCATTATAAGAAAGCACTGCTTGCCATCTGTGCTGGTGATGCTGAGGACT ANXA10 Annexin A10
5 1 1 5 447-NM_001769.2-PM CD9 NM_001769.2 GTCAGCTTACATCCCTGAGCAGGAAAGTTTACCCATGAAGATTGGTGGGA CD9 CD9 molecule
6 1 1 6 120-NM_000596.2-PM IGFBP1 NM_000596.2 GCTACCTGTGGTGATGTTGCCACCTGTTAAAATGTACACTGGATATGTTG IGFBP1 Insulin-like growth factor binding protein 1
7 1 1 7 102-NM_138578.1-PM BCL2L1 NM_138578.1 CCACCCCACACTTGTTCCAGCTCTTTGAAATAGTCTGTGTGAAGGTGAAA BCL2L1 BCL2-like 1
8 1 1 8 321-NM_000584.2-PM IL8 NM_000584.2 CCAGTCTTGTCATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGA IL8 Interleukin 8
9 1 1 9 120-NM_005953.2-PM MT2A NM_005953.2 AGCCCCGCTCCCAGATGTAAAGAACGCGACTTCCACAAACCTGGATTTTT MT2A Metallothionein 2A
10 1 1 10 310-NM_006755.1-PM TALDO1 NM_006755.1 GAAGCTGGAGCGGATGCTGACAGAACGAATGTTCAATGCAGAGAATGGAA TALDO1 Transaldolase 1
11 1 1 11 380-NM_003971.3-PM SPAG9 NM_003971.3 GTGGTTTACTCTGCCACAGTCTAATGTCATTCACTTCATTTGATGGGGTC SPAG9 Sperm associated antigen 9
12 1 1 12 446-NM_001679.2-PM ATP1B3 NM_001679.2 ACCCGGCCAACATCAAGTGACTTTATAGCTGCAAGAAATGTGGTATGTGG ATP1B3 "ATPase, Na+/K+ transporting, beta 3 polypeptide"
13 1 1 13 150-NM_002165.2-PM ID1 NM_002165.2 ATGGTCACGTTTGGTGCTTCTCAGATTTCTGAGGAAATTGCTTTGTATTG ID1 "Inhibitor of DNA binding 1, dominant negative helix-loop-helix protein"
14 1 1 14 110-NM_133491.2-PM SAT2 NM_133491.2 GGTGCCTATCCTCAAGTATTGGAAGAGCAGAATTGAGGGAGAGACCTTTC SAT2 Spermidine/spermine N1-acetyltransferase 2
15 1 1 15 155-NM_002496.1-PM NDUFS8 NM_002496.1 ATGAGGAGCTGCTGTACAACAAGGAGAAGTTGCTCAACAACGGGGACAAG NDUFS8 "NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)"
16 1 1 16 58-NM_003122.2-PM SPINK1 NM_003122.2 CATCAGGTCACCGCGAGGCCTGACTGGCCTTATTGTTGAATAAATGTATC SPINK1 "Serine peptidase inhibitor, Kazal type 1"
17 1 1 17 243-NM_004354.1-PM CCNG2 NM_004354.1 TAGGCTAGGGCTCTTAGTTTTCATTCCTATTGCCCCAAGTATTGTCAAAC CCNG2 Cyclin G2
18 1 1 18 97-NM_058172.3-PM ANTXR2 NM_058172.3 GCTCAAGTTTATTTATGTCACTGGCTGGCTGGATCCAAAGTCATGTGTCC ANTXR2 Anthrax toxin receptor 2
19 1 1 19 84-NM_006087.2-PM TUBB4 NM_006087.2 CCTCCCCGCTTCCCTGCCTCACCCTCAATAAATAAATTAATTGTTGTCAT TUBB4 "Tubulin, beta 4"
20 1 1 20 286-NM_006597.3-PM HSPA8 NM_006597.3 CAGGGCCCACCATTGAAGAGGTTGATTAAGCCAACCAAGTGTAGATGTAG HSPA8 Heat shock 70kDa protein 8

Total number of rows: 6776

Table truncated, full table size 951 Kbytes.




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Supplementary data files not provided
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