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| Status |
Public on Aug 21, 2009 |
| Title |
Affymetrix Human Genome U133A Array [CDF: XLab gahgu133a_2.0.1] |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Affymetrix |
| Manufacture protocol |
Refer to GPL96 platform for the complete description of HG-U133A manufacture protocol
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| Description |
Custom definition files for Affymetrix HG-U133A arrays
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| Web link |
http://www.xlab.unimo.it/GA_CDF/
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| Contributor(s) |
Ferrari F, Bortoluzzi S, Coppe A, Sirota A, Safran M, Shmoish M, Ferrari S, Lancet D, Danieli G, Bicciato S |
| Citation(s) |
18005434 |
| Submission date |
Aug 12, 2009 |
| Last update date |
Aug 25, 2009 |
| Contact name |
Luca Agnelli |
| E-mail(s) |
luca.agnelli@istitutotumori.mi.it, luca.agnelli@gmail.com
|
| Phone |
+390223903581
|
| Organization name |
IRCCS Istituto Nazionale dei Tumori
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| Department |
Department of Advanced Diagnostics
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| Street address |
Venezian 1
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| City |
MILAN |
| ZIP/Postal code |
20133 |
| Country |
Italy |
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| Samples (40)
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GSM442690, GSM442691, GSM442692, GSM442693, GSM442694, GSM442695
GSM442696, GSM442697, GSM442698, GSM442699, GSM442700, GSM442701, GSM442702, GSM442703, GSM442704, GSM442705, GSM442706, GSM442707, GSM442708, GSM442709, GSM442710, GSM442711, GSM442712, GSM442713, GSM442714, GSM442715, GSM442716, GSM442717, GSM442718, GSM442719, GSM442720, GSM442721, GSM442722, GSM442723, GSM442724, GSM442725, GSM442726, GSM442727, GSM442728, GSM442729
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| Series (1) |
| GSE17498 |
Identification of MicroRNA Expression Patterns and a MicroRNAs/mRNA Regulatory Network in Multiple Myeloma |
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| Relations |
| Alternative to |
GPL96 (Alternative CDF [official]) |
| Data table header descriptions |
| ID |
|
| ORF |
Gene symbol |
| Entrez ID |
Entrez ID |
| chr |
Chromosome |
| start.loc |
Gene 5'-start absolute position (bp) |
| end.loc |
Gene 3'-end absolute position (bp) |
| SPOT_ID |
|
| Data table |
| ID |
ORF |
Entrez ID |
chr |
start.loc |
end.loc |
SPOT_ID |
| GC00U921857_at |
|
|
NA |
NA |
NA |
GC00U921857_at |
| GC00U922298_at |
LOC100093698 |
100093698 |
NA |
NA |
NA |
|
| GC00U990668_at |
HR44 |
27251 |
NA |
NA |
NA |
|
| GC00U990680_at |
HUMBINDC |
29892 |
NA |
NA |
NA |
|
| GC00U990706_at |
LOC51190 |
51190 |
NA |
NA |
NA |
|
| GC00U990756_at |
|
|
NA |
NA |
NA |
GC00U990756_at |
| GC00U990780_at |
HSAJ2425 |
55566 |
NA |
NA |
NA |
|
| GC00U990809_at |
KIAA0485 |
57235 |
NA |
NA |
NA |
|
| GC00U990811_at |
KIAA0506 |
57239 |
NA |
NA |
NA |
|
| GC00U990813_at |
KIAA0509 |
57242 |
NA |
NA |
NA |
|
| GC00U991001_at |
MGC12488 |
84786 |
NA |
NA |
NA |
|
| GC01M000752_at |
|
|
NA |
NA |
NA |
GC01M000752_at |
| GC01M000869_at |
NOC2L |
26155 |
1 |
869446 |
884542 |
|
| GC01M001136_at |
TNFRSF4 |
7293 |
1 |
1136569 |
1139411 |
|
| GC01M001143_at |
SDF4 |
51150 |
1 |
1142151 |
1157274 |
|
| GC01M001236_at |
CPSF3L |
54973 |
1 |
1236828 |
1249909 |
|
| GC01M001261_at |
DVL1 |
1855 |
1 |
1260521 |
1274623 |
|
| GC01M001329_at |
MRPL20 |
55052 |
1 |
1327159 |
1332524 |
|
| GC01M001646_at |
SLC35E2 |
9906 |
1 |
1646137 |
1667291 |
|
| GC01M001715_at |
NADK |
65220 |
1 |
1672531 |
1701368 |
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Total number of rows: 12279
Table truncated, full table size 580 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL9021_gahgu133a_2.0.1.cdf.gz |
5.5 Mb |
(ftp)(http) |
CDF |
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