NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL9117 Query DataSets for GPL9117
Status Public on Dec 25, 2009
Title OciChip Zebrafish 14K
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Danio rerio
Manufacturer Ocimum Biosolutions
Manufacture protocol contains 50-mer probes representing 8,839 genes in 14,067 spots
 
 
Contributor(s) Saul KE, Koke JR, Garcia DM
Submission date Aug 27, 2009
Last update date Jan 18, 2013
Contact name Dana M Garcia
E-mail(s) dg08@txstate.edu
Phone 512-245-3368
Fax 512-245-8713
Organization name Texas State University-San Marcos
Department Biology
Lab Garcia/Koke Lab
Street address 601 University Drive
City San Marcos
State/province TX
ZIP/Postal code 78666
Country USA
 
Samples (5) GSM445916, GSM445917, GSM445918, GSM445919, GSM736711
Series (2)
GSE17854 Differential gene expression in Danio rerio during optic nerve regeneration
GSE29696 Diurnal Variation of Melatonin Receptors in Danio rerio (Zebrafish)

Data table header descriptions
ID
GB_ACC Genbank Accession number for sequences from which oligos were derived
OLIGO_ID Proprietary identifier for the specific oligonucleotide used
ORGANISM
GENE SYMBOL Abbreviated descriptor of the gene represented by the oligonucleotide
SPOT_ID spot identifier

Data table
ID GB_ACC OLIGO_ID ORGANISM GENE SYMBOL SPOT_ID
1 NM_131652.1 obszebrafish_00001 Danio rerio nitr3a
2 AL591476.7 obszebrafish_00005 Danio rerio nitr1n
3 AL591391.5 obszebrafish_00009 Danio rerio
4 NM_131154.1 obszebrafish_00013 Danio rerio cyp19a1a
5 NM_131734.3 obszebrafish_00125 Danio rerio gstp1
6 BC134000.1 obszebrafish_00129 Danio rerio igiv1s5
7 AB006323.2 obszebrafish_00133 Danio rerio maf
8 XM_001346372.1 obszebrafish_00137 Danio rerio nurr1
9 NM_213302.1 obszebrafish_00253 Danio rerio zgc:77052
10 NM_131883.1 obszebrafish_00257 Danio rerio psap
11 NM_194374.1 obszebrafish_00261 Danio rerio LOC560950
12 AL591520.5 obszebrafish_00265 Danio rerio
13 NM_205689.1 obszebrafish_00381 Danio rerio zgc:77804
14 NM_001003844.1 obszebrafish_00385 Danio rerio rpl6
15 NM_001002139.1 obszebrafish_00389 Danio rerio rpl11
16 NM_213293.1 obszebrafish_00393 Danio rerio zgc:77172
17 NM_213091.1 obszebrafish_00509 Danio rerio elmo1
18 BC134863.1 obszebrafish_00513 Danio rerio LOC556764
19 XR_029715.1 obszebrafish_00517 Danio rerio
20 BX571850.7 obszebrafish_00521 Danio rerio

Total number of rows: 14240

Table truncated, full table size 794 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap