NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL9462 Query DataSets for GPL9462
Status Public on Jan 01, 2010
Title MPIIB Exiqon Human/Mouse/Rat 16K mirCURY pre-release
Technology type spotted oligonucleotide
Distribution non-commercial
Organisms Homo sapiens; Mus musculus; Rattus norvegicus
Manufacturer Exiqon A/S, Vedbaek, Denmark
Manufacture protocol Locked nucleic acids (LNA) modified microarray capture probes (miRCURY Probe Set, Prod. No. pre-release) were supplied at 480 pmol (Exiqon A/S, Vedbaek, Denmark). Independent of supplier, probes were suspended at a final concentration of 100 µM in Nexterion spot2 buffer (Schott AG, Mainz, Germany) and printed by a BioRobotics MicroGrid II robot (Genomic Solutions Ltd., Huntingdon, UK) onto glass slides coated with poly-L-lysine at 50-55% humidity and room temperature using MicroSpot 2500 quill pins (Genomic Solutions Ltd.). Each slide contained 4 identical replicates with 4 subgrids, respectively. Capture probes were crosslinked to the support by UV irradiation with a total energy of 240mJ UV and blocked with succinic anhydride and 1-methyl-2-pyrrolidone in borate buffer (Fluka, Deisendorf, Germany).
 
 
Contributor(s) Mollenkopf H
Submission date Oct 19, 2009
Last update date Jan 01, 2010
Contact name Hans-Joachim Mollenkopf
E-mail(s) mollenkopf@mpiib-berlin.mpg.de
Phone +49 30 28460 482
Organization name Max-Planck-Institute for Infection Biology
Lab Microarray/Genomics Core Facility
Street address Charitéplatz 1
City Berlin
ZIP/Postal code 10117
Country Germany
 
Samples (8) GSM462788, GSM462789, GSM462790, GSM462791, GSM462792, GSM462793 
Series (1)
GSE18616 Helicobacter pylori induce miR-155 in T cells in a cAMP-Foxp3 dependant manner

Data table header descriptions
ID
Row
Col
ProbeUID
ControlType
ProbeName
GeneName
miRNA_ID miRBase ID
SPOT_ID

Data table
ID Row Col ProbeUID ControlType ProbeName GeneName miRNA_ID SPOT_ID
20 1 20 19 0 18827 cp72-hsa-let-7a hsa-let-7a
40 1 40 19 0 18827 cp72-hsa-let-7a hsa-let-7a
91 3 11 50 0 19283 cp65-hsa-let-7a hsa-let-7a
111 3 31 50 0 19283 cp65-hsa-let-7a hsa-let-7a
133 4 13 72 0 19285 cp65-hsa-let-7a-MM hsa-let-7a
153 4 33 72 0 19285 cp65-hsa-let-7a-MM hsa-let-7a
820 21 20 19 0 18827 cp72-hsa-let-7a hsa-let-7a
840 21 40 19 0 18827 cp72-hsa-let-7a hsa-let-7a
891 23 11 50 0 19283 cp65-hsa-let-7a hsa-let-7a
911 23 31 50 0 19283 cp65-hsa-let-7a hsa-let-7a
933 24 13 72 0 19285 cp65-hsa-let-7a-MM hsa-let-7a
953 24 33 72 0 19285 cp65-hsa-let-7a-MM hsa-let-7a
420 11 20 209 0 18828 cp72-hsa-let-7b hsa-let-7b
440 11 40 209 0 18828 cp72-hsa-let-7b hsa-let-7b
1220 31 20 209 0 18828 cp72-hsa-let-7b hsa-let-7b
1240 31 40 209 0 18828 cp72-hsa-let-7b hsa-let-7b
12 1 12 11 0 18829 cp72-hsa-let-7c hsa-let-7c
32 1 32 11 0 18829 cp72-hsa-let-7c hsa-let-7c
812 21 12 11 0 18829 cp72-hsa-let-7c hsa-let-7c
832 21 32 11 0 18829 cp72-hsa-let-7c hsa-let-7c

Total number of rows: 1600

Table truncated, full table size 78 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap