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Platform GPL9524 Query DataSets for GPL9524
Status Public on Jan 11, 2010
Title [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Alternative CDF: affy10736alt]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol This is identical to GPL6096 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
 
 
Submission date Nov 03, 2009
Last update date Jan 11, 2010
Contact name Marni J Falk
E-mail(s) falkm@email.chop.edu
Phone 215-590-4564
Organization name CHOP
Department Pediatrics/ Human Genetics
Lab ARC 1002c
Street address 3615 Civic Center Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Samples (4) GSM467880, GSM467881, GSM467882, GSM467883
Series (1)
GSE18677 Cross-platform expression microarray performance in a mouse model of mitochondrial disease therapy
Relations
Alternative to GPL6096 (Alternative CDF [official])

Data table header descriptions
ID Remapped probe set defined by AffyProbeMiner
Official_Symbol Number of probes in each probe set
Number_probes Official gene symbol
Entrezgene_ID NCBI Entrez gene ID
SPOT_ID set of genes
ORF

Data table
ID Official_Symbol Number_probes Entrezgene_ID SPOT_ID ORF
AFFYCUSTOMHF1 Ntrk1 47 18211 Ntrk1
AFFYCUSTOMHF10 Sh2d1a 20 20400 Sh2d1a
AFFYCUSTOMHF100 4933411G11Rik 22 330228 4933411G11Rik
AFFYCUSTOMHF1000 Scn10a 108 20264 Scn10a
AFFYCUSTOMHF10000 Dhrs1 49 52585 Dhrs1
AFFYCUSTOMHF10001 Dnmt3b;LOC668932;LOC673906 2 13436;668932;673906 Dnmt3b;LOC668932;LOC673906
AFFYCUSTOMHF10002 4930449I24Rik;EG622306;LOC622911;LOC622924;LOC630844;LOC631039;LOC673371;LOC674338 2 622306;622911;622924;630844;631039;673371;67410;674338 4930449I24Rik;EG622306;LOC622911;LOC622924;LOC630844;LOC631039;LOC673371;LOC674338
AFFYCUSTOMHF10003 LOC674773;Mbtps2;Zfhx2 1 239102;270669;674773 LOC674773;Mbtps2;Zfhx2
AFFYCUSTOMHF10004 LOC635381;Sntb2 1 20650;635381 LOC635381;Sntb2
AFFYCUSTOMHF10005 Acin1 35 56215 Acin1
AFFYCUSTOMHF10006 EG637273;LOC545161 4 545161;637273 EG637273;LOC545161
AFFYCUSTOMHF10007 LOC673566 2 673566 LOC673566
AFFYCUSTOMHF10008 Ptafr 23 19204 Ptafr
AFFYCUSTOMHF10009 Hspa9;LOC676823+666544:EG666544+671609:LOC671609 1 15526;676823 Hspa9;LOC676823+666544:EG666544+671609:LOC671609
AFFYCUSTOMHF1001 Crsp7;LOC666115;LOC670608;LOC675422 2 666115;670608;675422;70625 Crsp7;LOC666115;LOC670608;LOC675422
AFFYCUSTOMHF10010 Mpi1 8 110119 Mpi1
AFFYCUSTOMHF10011 Dnahc2 15 327954 Dnahc2
AFFYCUSTOMHF10012 Tmem132e 78 270893 Tmem132e
AFFYCUSTOMHF10013 Aldh1l1 35 107747 Aldh1l1
AFFYCUSTOMHF10014 BC068110;Nubp1 17 26425;383103 BC068110;Nubp1

Total number of rows: 57209

Table truncated, full table size 4151 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9524_affy10736alt.cdf.gz 20.2 Mb (ftp)(http) CDF

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