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Platform GPL9713 Query DataSets for GPL9713
Status Public on Mar 31, 2010
Title Mmca_MOUSE_NIAID
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer NIH/NIAID
Manufacture protocol The specifications include:
Length: 70 bases
Modification: 5'-C6 amino modifier
Oligo synthesis efficiency: < 99%
Reduced propensity to form secondary structure
Minimized cross-hybridization potential to non-target mouse or human genes
Consistent theoretical melting temperature with all other oligonucleotides
Bias to the 3' end of the gene for enhanced cDNA labeling
Targeted sequence region of high sequence fidelity and accuracy
Positive and negative controls provided
Oligonucleotides are purified for enriched full-length product and desalted
 
 
Submission date Nov 23, 2009
Last update date Apr 28, 2014
Contact name Dong-Mi Shin
E-mail(s) shindm@snu.ac.kr
Organization name seoul national university
Street address 1 gwanak-ro
City Seoul
ZIP/Postal code 151742
Country South Korea
 
Samples (5) GSM475042, GSM475061, GSM475062, GSM475063, GSM475064
Series (1)
GSE19162 Expression profiling of BORIS knockout mice testis

Data table header descriptions
ID
Block Block in array
Column column in each block
Row row in each block
Description full name of gene
Clone custom clone
GB_ACC refseq id
ORF Entrez id
ORF gene name
UniGene Unigene id
SPOT_ID spot id

Data table
ID Block Column Row Description Clone GB_ACC ORF ORF UniGene SPOT_ID
1 1 1 1 Tamara prelabeled MRF3_50 Control_4 MRF3_50 MRF3_50
2 1 2 1 Tamara prelabeled MRF3_50 Control_4 MRF3_50 MRF3_50
3 1 3 1 EMPTY
4 1 4 1 EMPTY
5 1 5 1 EMPTY
6 1 6 1 EMPTY
7 1 7 1 EMPTY
8 1 8 1 EMPTY
9 1 9 1 Tuba1--tubulin, alpha 1 (Tuba1), mRNA. M400011156 22142 Tuba1a Mm.439690
10 1 10 1 LOC14433--similar to glyceraldehyde-3-phosphate dehydrogenase (LOC14433), mRNA. M400010795 XR_033853 100047709 LOC100047709
11 1 11 1 Randomized negative control M2NC000006 M2NC000006
12 1 12 1 NC_000964_lysA Unknown
13 1 13 1 Eif4a2--eukaryotic translation initiation factor 4A2 (Eif4a2), mRNA. M300003570 NM_013506 13682 Eif4a2 Mm.260084
14 1 14 1 Wars--tryptophanyl-tRNA synthetase (Wars), mRNA. M300002655 NM_011710 22375 Wars Mm.38433
15 1 15 1 AF198054 Unknown
16 1 16 1 Control: Bacillus subtilis NC_000964_ybbR NC_000964_ybbR
17 1 17 1 Tcf1--transcription factor 1 (Tcf1), mRNA. M200000168 NM_009327 21405 Hnf1a Mm.332607
18 1 18 1 Ptpra--protein tyrosine phosphatase, receptor type, A (Ptpra), mRNA. M200000206 NM_008980 19262 Ptpra Mm.224246
19 1 19 1 S100a3--S100 calcium binding protein A3 (S100a3), mRNA. M200000250 NM_011310 20197 S100a3 Mm.440044
20 1 20 1 Magoh--mago-nashi homolog, proliferation-associated (Drosophila) (Magoh), mRNA. M200000288 NM_010760 17149 Magoh Mm.808

Total number of rows: 37632

Table truncated, full table size 4011 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
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