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Platform GPL9719 Query DataSets for GPL9719
Status Public on Jun 01, 2010
Title Custom Agilent/Univ Antwerp Human Cell 15K
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent
Manufacture protocol In situ printing of 60-mer oligonucleotides.
 
Description Combination of in-house custom MCF-7, H295R and C3a arrays.
 
Submission date Nov 25, 2009
Last update date Jan 17, 2013
Contact name Caroline Vanparys
E-mail(s) caroline.vanparys@ua.ac.be
Organization name University of Antwerp
Lab EB&T
Street address Groenenborgerlaan 171
City Antwerp
ZIP/Postal code 2020
Country Belgium
 

Data table header descriptions
ID
GB_ACC GenBank or RefSeq nucleotide accession
GeneSymbol Gene Symbol
GeneName Gene Name (Accession no for genes)
TopHit GenBank/RefSeq sequence reference
Description Description of the gene
SPOT_ID

Data table
ID GB_ACC GeneSymbol GeneName TopHit Description SPOT_ID
EBT_Cell_A_23_P163402 NM_000499 CYP1A1 NM_000499 ref|NM_000499|ens|ENST00000395048|ens|ENST00000379727|ens|ENST00000395049 Homo sapiens cytochrome P450, family 1, subfamily A, polypeptide 1 (CYP1A1), mRNA [NM_000499]
EBT_Cell_A_23_P143845 NM_015508 TIPARP NM_015508 ref|NM_015508|ens|ENST00000295924|gb|CR608896|gb|CR749647 Homo sapiens TCDD-inducible poly(ADP-ribose) polymerase (TIPARP), mRNA [NM_015508]
EBT_Cell_A_24_P355464 NM_004962 GDF10 NM_004962 ref|NM_004962|gb|D49492|gb|BC028237|ens|ENST00000224605 Homo sapiens growth differentiation factor 10 (GDF10), mRNA [NM_004962]
EBT_Cell_A_24_P226198 NM_005732 RAD50 NM_005732 ref|NM_005732|ref|NM_133482|ens|ENST00000265335|ens|ENST00000378823 Homo sapiens RAD50 homolog (S. cerevisiae) (RAD50), transcript variant 1, mRNA [NM_005732]
EBT_Cell_A_23_P35916 NM_000051 ATM NM_000051 ref|NM_000051|ref|NM_138292|ens|ENST00000278616|ens|ENST00000299392 Homo sapiens ataxia telangiectasia mutated (ATM), transcript variant 1, mRNA [NM_000051]
EBT_Cell_A_24_P942630 NM_001080424 JMJD3 NM_001080424 ref|NM_001080424|ens|ENST00000254846|gb|AB002344|gb|BC035897 Homo sapiens jumonji domain containing 3, histone lysine demethylase (JMJD3), mRNA [NM_001080424]
EBT_Cell_A_24_P93916 BC028207 PER1 BC028207 gb|BC028207|thc|THC2479619 Homo sapiens period homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5215552), complete cds. [BC028207]
EBT_Cell_A_24_P23625 HS3ST3B1 ENST00000360954 ens|ENST00000360954|gb|AK023723|gb|BC063301|thc|THC2521126 Heparan sulfate glucosamine 3-O-sulfotransferase 3B1 (EC 2.8.2.30) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1) (Heparan sulfate 3-O-sulfotransferase 3B1) (h3-OST-3B). [Source:Uniprot/SWISSPROT;Acc:Q9Y662] [ENST00000360954] Ensembl:ENST00000360954
EBT_Cell_A_32_P209173 AF116620 AF116620 gb|AF116620 Homo sapiens PRO1068 mRNA, complete cds. [AF116620]
EBT_Cell_A_24_P234768 NM_001040173 HTR4 NM_001040173 ref|NM_001040173|ref|NM_001040172|ref|NM_000870|ens|ENST00000360693 Homo sapiens 5-hydroxytryptamine (serotonin) receptor 4 (HTR4), transcript variant i, mRNA [NM_001040173]
EBT_Cell_A_32_P33723 BC028229 BTG3 BC028229 gb|BC028229|thc|THC2499236 Homo sapiens, clone IMAGE:5240818, mRNA. [BC028229]
EBT_Cell_A_23_P129786 NM_001005291 SREBF1 NM_001005291 ref|NM_001005291|ref|NM_004176|ens|ENST00000395757|ens|ENST00000395751 Homo sapiens sterol regulatory element binding transcription factor 1 (SREBF1), transcript variant 1, mRNA [NM_001005291]
EBT_Cell_A_24_P361480 NM_025185 TANC2 NM_025185 ref|NM_025185|ens|ENST00000389520|gb|AB046856|gb|AB032974 Homo sapiens tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 (TANC2), mRNA [NM_025185]
EBT_Cell_ETG05_66023 ETG05_66023 ETG05_66023 0 0 ETG05_66023
EBT_Cell_A_24_P252934 NM_000482 APOA4 NM_000482 ref|NM_000482|gb|BC074764|ens|ENST00000227666|ens|ENST00000357780 Homo sapiens apolipoprotein A-IV (APOA4), mRNA [NM_000482]
EBT_Cell_A_23_P118544 NM_004859 CLTC NM_004859 ref|NM_004859|gb|BC054489|ens|ENST00000269122|gb|CR625541 Homo sapiens clathrin, heavy chain (Hc) (CLTC), mRNA [NM_004859]
EBT_Cell_A_23_P69431 NM_000968 RPL4 NM_000968 ref|NM_000968|ref|NM_001114135|ens|ENST00000307961|gb|CR605656 Homo sapiens ribosomal protein L4 (RPL4), mRNA [NM_000968]
EBT_Cell_A_24_P90881 NM_024922 CES3 NM_024922 ref|NM_024922|gb|AY358609|ens|ENST00000394037|ens|ENST00000303334 Homo sapiens carboxylesterase 3 (brain) (CES3), mRNA [NM_024922]
EBT_Cell_A_32_P58062 BX538300 BX538300 gb|BX538300|thc|THC2644696 Homo sapiens mRNA; cDNA DKFZp686K0394 (from clone DKFZp686K0394) [BX538300]
EBT_Cell_A_24_P2093 NM_020196 XAB2 NM_020196 ref|NM_020196|gb|BC007208|ens|ENST00000358368|gb|DQ893187 Homo sapiens XPA binding protein 2 (XAB2), mRNA [NM_020196]

Total number of rows: 8078

Table truncated, full table size 1518 Kbytes.




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