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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 01, 2011 |
| Title |
Arabidopsis thaliana 43.7K Ath_Agilent_v2_Riechmann |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Arabidopsis thaliana |
| Manufacturer |
Agilent |
| Manufacture protocol |
Custom-commercial array manufactured by Agilent (eArray) using its SurePrint technology (In Situ Synthesis Printing). http://www.chem.agilent.com/en-us/products/instruments/dnamicroarrays/pages/gp557.aspx
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| Support |
glass |
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| Contributor(s) |
Riechmann JL, Mathog D, Centeno E |
| Submission date |
Jan 27, 2010 |
| Last update date |
Jun 14, 2013 |
| Contact name |
Jose Luis Riechmann |
| E-mail(s) |
joseluis.riechmann@cragenomica.es
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| Organization name |
Center for Research in Agricultural Genomics
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| Street address |
Campus UAB - Edifici CRAG
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| City |
Bellaterra |
| State/province |
Barcelona |
| ZIP/Postal code |
08193 |
| Country |
Spain |
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| Samples (44)
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GSM506189, GSM506190, GSM506191, GSM506192, GSM506193, GSM506194
GSM506195, GSM506196, GSM506197, GSM506198, GSM506199, GSM506200, GSM506201, GSM506202, GSM506203, GSM506204, GSM1093913, GSM1093914, GSM1093915, GSM1093916, GSM1093917, GSM1093918, GSM1093919, GSM1093920, GSM1093921, GSM1093922, GSM1093923, GSM1093924, GSM1093925, GSM1093926, GSM1093927, GSM1093928, GSM1164022, GSM1164023, GSM1164024, GSM1164025, GSM1164026, GSM1164027, GSM1164028, GSM1164029, GSM1164030, GSM1164031, GSM1164032, GSM1164033
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| Series (4)
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| GSE20175 |
Ath_Agilent_v2_Riechmann array expression profile AP1-GR ap1cal inflorescences - chx experiment |
| GSE44919 |
Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS (expression) |
| GSE45939 |
Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS |
| GSE47981 |
Expression profile pAP1-AP1-GR ap1cal inflorescences - time series (days) |
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| Data table header descriptions |
| ID |
|
| CLONE ID |
Identifier of the gene or sequence represented by a given array element |
| SEQUENCE_NAME(S) |
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| SEQUENCE_DESCRIPTION |
Description of gene or gene product represented by an element |
| SEQUENCE |
probe sequence |
| CLONE_ID |
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| SPOT_ID |
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| Data table |
| ID |
CLONE ID |
SEQUENCE_NAME(S) |
SEQUENCE_DESCRIPTION |
SEQUENCE |
CLONE_ID |
SPOT_ID |
| CUST_26113_PI410396117 |
AT2G36080 |
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TFABI3/VP1 DNA-binding protein, putative |
GGTGTAGTGAAACACAATAGTTTTTCCAACCATTTAGCTCGATTATTAACTAAGCCATTG |
AT2G36080 |
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| CUST_26112_PI410396117 |
AT2G36080 |
|
TFABI3/VP1 DNA-binding protein, putative |
TTACATTTCTTGTAAAACCGAACCTTAATGGGCGTTACTACCTTAGTAGTTCAATTCGTT |
AT2G36080 |
|
| CUST_4486_PI410396108 |
AT2G36080 |
|
TFABI3/VP1 DNA-binding protein, putative |
ATGGAGATTCAGATACTCGTACTGGAACAGTAGCCAGAGTTATGTCTTGACCAAAGGCTG |
AT2G36080 |
|
| CUST_26474_PI410396117 |
AT3G11580 |
|
TFABI3/VP1 DNA-binding protein, putative |
CTTTTTCATAAAAATAGATGATTCGTAATTTGTATTGCATATTTACATGTTCTCTTAAAA |
AT3G11580 |
|
| CUST_4488_PI410396108 |
AT2G36080 |
|
TFABI3/VP1 DNA-binding protein, putative |
ACCATGGAGATTCAGATACTCGTACTGGAACAGTAGCCAGAGTTATGTCTTGACCAAAGG |
AT2G36080 |
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| CUST_4608_PI410396108 |
AT3G11580 |
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TFABI3/VP1 DNA-binding protein, putative |
AGGCGACGTTGTTTTCTTTCAACGTCACCGTTTTGATCTCCATAGACTCTTCATTGGCTG |
AT3G11580 |
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| CUST_26473_PI410396117 |
AT3G11580 |
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TFABI3/VP1 DNA-binding protein, putative |
GGGCCCATACTTGGCCCAATTGTCATAGAGAAAAAATGGACAAGAATTAATATTATTAGT |
AT3G11580 |
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| CUST_4607_PI410396108 |
AT3G11580 |
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TFABI3/VP1 DNA-binding protein, putative |
ATTGGAGCGGCTTGACTACACCTTATCGTCAAGTACACGCGTCAACTACTTACCCTAATA |
AT3G11580 |
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| CUST_4606_PI410396108 |
AT3G11580 |
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TFABI3/VP1 DNA-binding protein, putative |
TTATCGTCAAGTACACGCGTCAACTACTTACCCTAATATTCACCAAGAGTATTCACACTA |
AT3G11580 |
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| CUST_4487_PI410396108 |
AT2G36080 |
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TFABI3/VP1 DNA-binding protein, putative |
CATGGAGATTCAGATACTCGTACTGGAACAGTAGCCAGAGTTATGTCTTGACCAAAGGCT |
AT2G36080 |
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| CUST_1429_PI410396108 |
AT2G30470 |
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TFABI3/VP1 HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor HSI2,HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2,VAL1,VP1/ABI3-LIKE 1 |
TTGTTGTAGAAGGCAAATGGAGCTTTGTGCTTGGTGATGAAACAGTTGAGTTGATTTTTT |
AT2G30470 |
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| CUST_1430_PI410396108 |
AT2G30470 |
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TFABI3/VP1 HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor HSI2,HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2,VAL1,VP1/ABI3-LIKE 1 |
CATAGTTGTAGGAAAAATAAGTTTCTGGTTCTAAACAGCGACAATGTCCCATCTTTTGTT |
AT2G30470 |
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| CUST_1431_PI410396108 |
AT2G30470 |
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TFABI3/VP1 HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor HSI2,HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2,VAL1,VP1/ABI3-LIKE 1 |
TAAAAGCCAAAGTCATAGCCAGTTTTATTAATATGCTGAGACCAAGAGTAGGAGAAGAAG |
AT2G30470 |
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| CUST_2906_PI410396108 |
AT4G32010 |
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TFABI3/VP1 HSI2-L1/HSL1 (HSI2-LIKE 1); transcription factor HSI2-L1,HSL1,HSI2-LIKE 1,VAL2,VP1/ABI3-LIKE 2 |
GTTATATCTAATATGGAAATGGATGAAGCTTCTAAGAAGAGAATCGGTTCTGGAGGTGGA |
AT4G32010 |
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| CUST_2905_PI410396108 |
AT4G32010 |
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TFABI3/VP1 HSI2-L1/HSL1 (HSI2-LIKE 1); transcription factor HSI2-L1,HSL1,HSI2-LIKE 1,VAL2,VP1/ABI3-LIKE 2 |
GCTTCAAATTTGTACGCCTATCTATCGCAATCTTAAGTTTCAAAATTCGAACCTGTACAT |
AT4G32010 |
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| CUST_2907_PI410396108 |
AT4G32010 |
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TFABI3/VP1 HSI2-L1/HSL1 (HSI2-LIKE 1); transcription factor HSI2-L1,HSL1,HSI2-LIKE 1,VAL2,VP1/ABI3-LIKE 2 |
GCTTGAGAGAGAGAGACAAATAGATTTGATGAGGTTTTTGAAAATACATAGGACACTAAC |
AT4G32010 |
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| CUST_1734_PI410396108 |
AT2G46870 |
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TFABI3/VP1 NGA1 (NGATHA1); transcription factor NGA1,NGATHA1 |
AATCATCAGCAGCAACGTCATCATCACAGTGGTGGTGGTTATAATTATCATCAAATTCCG |
AT2G46870 |
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| CUST_1733_PI410396108 |
AT2G46870 |
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TFABI3/VP1 NGA1 (NGATHA1); transcription factor NGA1,NGATHA1 |
AGAGAATTTGGTTATGGTTACTTCGTTAGGTCAGTGGATCAGAGGAACAATCCTGCGGCT |
AT2G46870 |
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| CUST_1732_PI410396108 |
AT2G46870 |
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TFABI3/VP1 NGA1 (NGATHA1); transcription factor NGA1,NGATHA1 |
ACTTGGAAGCAGCAGTGAAGATGATCACTTCACTAAGAAAGGAAAGTCTTCATTGTCTTT |
AT2G46870 |
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| CUST_2457_PI410396108 |
AT3G61970 |
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TFABI3/VP1 NGA2 (NGATHA2); transcription factor NGA2,NGATHA2 |
ATTGGATACTATGTGAGGTCAATGGAGAGGAGTCATCCAACGGCTGTGATTGAATCTGTG |
AT3G61970 |
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Total number of rows: 43700
Table truncated, full table size 8122 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL9984_023137_D_GEO_20090228.txt.gz |
1.7 Mb |
(ftp)(http) |
TXT |
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