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Platform GPL9998 Query DataSets for GPL9998
Status Public on Feb 03, 2010
Title Agilent Dano rerio 44K custom chip [Agilent-021643 Feature number version]
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Danio rerio
Manufacturer Agilent
Manufacture protocol see manufacturer's website
 
Description GPL15799 is a PROBE NAME version of this same array (design id 021643).
 
Submission date Feb 01, 2010
Last update date Jul 12, 2012
Contact name Håvard Aanes
E-mail(s) havard.aanes@nvh.no
Organization name Norwegian School of Veterinary Science
Department Biochemistry
Street address Ullevålsveien 72
City Oslo
State/province Oslo
ZIP/Postal code 0883
Country Norway
 
Samples (7) GSM503896, GSM503897, GSM503898, GSM503899, GSM503900, GSM503901 
Series (1)
GSE20137 Gene expression in unfertilized eggs and the MBT stage of zebrafish embryos
Relations
Alternative to GPL15799

Data table header descriptions
ID
Row
Col
accessions
chr_coord
SubTypeMask
SubTypeName
Start
SEQUENCE
GB_ACC
CLONE_ID
SPOT_ID
ORF
ProbeUID
ControlType
ProbeName
GeneName
SystematicName

Data table
ID Row Col accessions chr_coord SubTypeMask SubTypeName Start SEQUENCE GB_ACC CLONE_ID SPOT_ID ORF ProbeUID ControlType ProbeName GeneName SystematicName
1 1 1 260 BrightCorner 0 --BrightCorner 0 1 GE_BrightCorner GE_BrightCorner GE_BrightCorner
2 1 2 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
3 1 3 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
4 1 4 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
5 1 5 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
6 1 6 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
7 1 7 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
8 1 8 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
9 1 9 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
10 1 10 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
11 1 11 66 Structural 0 --Structural 1 1 DarkCorner DarkCorner DarkCorner
12 1 12 ref|NM_001008582|ens|ENSDART00000064202 unmapped 0 0 ACAAACCAAAGATCCCAAATTTGACGATGACCAGCAGGCACTGAAGAAGATGGTACCTCA NM_001008582 3 0 A_15_P194191 zgc:103710 NM_001008582
13 1 13 gb|BC122311 unmapped 0 0 GGCTGTAAGAACACTGCAACAACAATACATACAAATAAAGCGTGACTCTTTTTACTGAAA BC122311 5 0 A_15_P177511 zgc:103710 BC122311
14 1 14 ens|ENSDART00000073976|ug|XM_691154 unmapped 0 0 AAATTCGAGATGAACAAGCAGCTTTCAGAGCGAGGATCCCTCATAATCTACCTGGACAAG ens|Complement C3 precursor [Contains: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3c alpha' chain fragment 1; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; 7 0 A_15_P310441 ENSDART00000073976 ENSDART00000073976
15 1 15 ref|NM_199975|ens|ENSDART00000019573|gb|BC071501|gb|BC058304 unmapped 0 0 CGCTTTCTTCGAAGTCGCCGGACATCTGAAGCCAACATGCGCGAGATATTGCACCTGCAG NM_199975 9 0 A_15_P108190 zgc:65894 NM_199975
16 1 16 ug|XM_001341845 unmapped 0 0 GTGAATAACTGGAATGATCTCCCATGTTCAAATCTAAGAAGAGGCATTTGTGAGAAATAA XM_001341845 11 0 A_15_P240621 LOC100001994 XM_001341845
17 1 17 ref|XM_001341905 unmapped 0 0 AAGTGGGTGGACAACTCACCACTGAATCAAGGTCAAGACCCAAAACACATGACCAAATGA XM_001341905 13 0 A_15_P546847 LOC100002066 XM_001341905
18 1 18 ens|ENSDART00000098423|ug|XM_682261 unmapped 0 0 ACTCCAAATAACTGGAATGATCGCAGATGCTCAGATTCAAGAAAAGCAGTTTGTGAGAAA LOC558967 15 0 A_15_P135596 LOC558967 ENSDART00000098423
19 1 19 ref|NM_199975|ens|ENSDART00000019573|gb|BC071501|gb|BC058304 unmapped 0 0 GGAGAGTTCGAGGAGGAGGGCGAAGAGGAGGCTGCGTGATCGCCATCGCTTACATTATTA NM_199975 17 0 A_15_P115302 zgc:65894 NM_199975
20 1 20 ref|NM_001045323|ens|ENSDART00000089358|gb|BC133971|tc|TC311679 unmapped 0 0 CACATCTGGAGAGGAAAGATTATATTTGTACTTTGCCAGGTACTGTTTTTGTACTGTATA NM_001045323 19 0 A_15_P148911 crb3b NM_001045323

Total number of rows: 45220

Table truncated, full table size 9885 Kbytes.




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