|
| Status |
Public on Jun 15, 2017 |
| Title |
CLIP-seq analysis of NC-RNA interactions in wild-type and eccentric particles |
| Organism |
Human immunodeficiency virus 1 |
| Experiment type |
Other
|
| Summary |
Nucleocapsid (NC) CLIP-seq experiments were conducted on wild-type and eccentric HIV-1 virions generated in the presence of allosteric integrase inhibitor, BI-B2.
|
| |
|
| Overall design |
NC CLIP-seq experiments were conducted by immunoprecipitation of NC-RNA complexes from fully formed mature and eccentric virus particles. Libraries of RNA molecules bound by NC were generated and sequenced by Illumina Hi-Seq2500 platform.
|
| |
|
| Contributor(s) |
Kutluay SB |
| Citation(s) |
28615207 |
| |
| Submission date |
Jun 14, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Sebla Bulent Kutluay |
| E-mail(s) |
kutluay@wustl.edu
|
| Organization name |
Washington University School of Medicine
|
| Street address |
Washington University School of Medicine
|
| City |
Saint Louis |
| State/province |
Missouri |
| ZIP/Postal code |
63110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL22068 |
Illumina HiSeq 2500 (Human immunodeficiency virus 1) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA390491 |
| SRA |
SRP109162 |
Less...
More...