|
| Status |
Public on Jul 03, 2017 |
| Title |
DNase-seq during MCF10A-ER-Src cell transformation |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed DNase-seq to study the dynamic genome-wide chromatin accessibility during MCF10A-ER-Src cell transformation.
|
| |
|
| Overall design |
DNase-seq at 0, 6, 24 hr during MCF10A-ER-Src cell transformation
|
| |
|
| Contributor(s) |
Ji Z, Stamatoyannopoulos J, Struhl K |
| Citation(s) |
29802342, 34463254 |
| Submission date |
Jun 20, 2017 |
| Last update date |
Oct 06, 2021 |
| Contact name |
Zhe Ji |
| E-mail(s) |
zhe.ji@northwestern.edu
|
| Organization name |
Northwestern University
|
| Street address |
303 E Superior St, Lurie 6-107
|
| City |
Chicago |
| State/province |
ILLINOIS |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE100259 |
Genome-scale identification of transcription factors that mediate an inflammatory network during breast cellular transformation |
|
| Relations |
| BioProject |
PRJNA391165 |
| SRA |
SRP109816 |
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