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| Status |
Public on Dec 04, 2018 |
| Title |
Transcriptome analysis of a red-flowered white clover mutant |
| Organism |
Trifolium repens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Transcriptomes analysis of the petals from a red-flowered white clover mutant (red flowers) and its shade-treated counterpart (white flowers) grown under shaded conditions was performed using high-throughput sequencing. We obtained 121,626,564 and 130,577,944 clean reads in red-flowered mutant and treated counterpart, respectively. Of these clean reads, we respectively gained 125,350 and 99,638 unigene sequencces in two groups. As a result, a total of 157,964 unigenes were obtained with an average length of 728 bp and a median length of 1346 bp. These findings provideed insights into the expression profiles in red-flowered white clover mutant, and deepened our understanding of flower pigmentation in white clower.
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| Overall design |
Petaline mRNA profiles of a red-flowered white clover mutant and its treated counterpart grown under shaded conditions by deep sequencing, in triplicate.
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| Contributor(s) |
Zhang H, Liu Y |
| Citation(s) |
28966045 |
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| Submission date |
Jul 10, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Heshan Zhang |
| E-mail(s) |
sdzhanghs@163.com
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| Phone |
+86-27-87680959
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| Organization name |
Hubei Academy of Agricultural Sciences
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| Department |
Institute of Animal Husbandry and Veterinary science
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| Street address |
Southern Lake Street, Hongshan District, Wuhan city, China
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| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430064 |
| Country |
China |
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| Platforms (1) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA393638 |
| SRA |
SRP111444 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE101059_All-Unigene-sdzhanghs.fa.gz |
29.8 Mb |
(ftp)(http) |
FA |
| GSE101059_RAW.tar |
5.9 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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