NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE102314 Query DataSets for GSE102314
Status Public on Oct 31, 2017
Title Differential Expression of MicroRNAs in Leprosy Skin Lesions
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study, a comprehensive assessment of human miRNA was performed on leprosy skin lesions using DNA chip microarrays, which included the entire spectrum of the disease along with its reactional states. Sixty-eight samples from leprotic lesions (10TT, 10BT, 10BB, 10BL, 4LL, 14R1, and 10R2) and nine skin biopsies from healthy
individuals were used as controls (CC) (ages ranged from 06 to 83 years, 48 were male and 29 female). The evaluation identified differentially expressed miRNAs [Fold Change (FC)≥2.0, p<0.05] in disease lesions versus healthy controls or between them. Some of these miRNAs were validated by RT-PCR.
 
Overall design The sequence of events for this study followed the order below. Patients who were treated for leprosy were examined by leprologists and submitted to two biopsy procedures. One biopsy was processed for histopathological analysis and bacilloscopy, the other was immediately stored in RNAlater® solution (Ambion) for further RNA extraction. Sixty-eight samples from leprotic lesions (10TT, 10BT, 10BB, 10BL, 4LL, 14R1, and 10R2) were selected for analysis. In addition, nine skin biopsies from healthy individuals were usedas controls (CC). Differentially expressed miRNAs identified in the cDNA microarray assay were validated by quantitative RT-PCR.
 
Contributor(s) Soares CT, Trombone AP, Fachin LR, Rosa PS, Ghidella CC, Ramalho RF, Pinilla MG, Carvalho AF, Carraro DM, Soares FA, Belone AF
Citation(s) 28970833
Submission date Aug 07, 2017
Last update date Jul 25, 2021
Contact name Alex FIORINI Carvalho
E-mail(s) alexficar@gmail.com
Phone 5531982596868
Organization name UFMG
Department DMVP
Lab AQUACEN
Street address Avenida Antonio Carlos 6627
City Belo Horizonte
State/province MG
ZIP/Postal code 31010500
Country Brazil
 
Platforms (1)
GPL15018 Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Feature Number version)
Samples (77)
GSM2734499 45R Tuberculoid leprosy form - TT
GSM2734500 114R Borderline-Tuberculoid leprosy form - BT
GSM2734501 94R Borderline Borderline leprosy form - BB
Relations
BioProject PRJNA397418

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102314_RAW.tar 523.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap