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Series GSE102380 Query DataSets for GSE102380
Status Public on Dec 06, 2017
Title RNA binding partners of the post-transcriptional regulator CsrA
Organism Escherichia coli str. K-12 substr. MG1655
Experiment type Other
Summary Analysis of RNA binding partners of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli
 
Overall design 5 biological replicates CLIP-seq samples from 3xFLAG-CsrA and untagged control strains
 
Contributor(s) Potts AH, Romeo T
Citation(s) 29150605
Submission date Aug 08, 2017
Last update date May 15, 2019
Contact name Anastasia Haley Potts
E-mail(s) anastasi@ufl.edu
Organization name University of Florida
Department Department of Microbiology and Cell Science
Lab Dr. Tony Romeo
Street address 1355 Museum Drive, Bldg. 981
City Gainesville
State/province FL
ZIP/Postal code 32611
Country USA
 
Platforms (1)
GPL15010 Illumina HiSeq 2000 (Escherichia coli str. K-12 substr. MG1655)
Samples (10)
GSM2735763 3xFLAG-CsrA 1
GSM2735764 3xFLAG-CsrA 2
GSM2735765 3xFLAG-CsrA 3
This SubSeries is part of SuperSeries:
GSE102386 The contribution of the post-transcriptional regulator CsrA to RNA stability and translation and identification of binding partners
Relations
BioProject PRJNA397601
SRA SRP115053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102380_peakCounts.csv.gz 253.9 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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