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Series GSE102653 Query DataSets for GSE102653
Status Public on Aug 14, 2018
Title Genome wide expression change by SMURF1 knocking down in MCF-7 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We aim to the investigate the role of SMURF1 in breast cancer progression. MCF-7 cells were used as the model and SMURF1 was silenced by siRNA.
 
Overall design The MCF-7 cells were treated with 50nM stramble siRNA and siSMURF1. After 48 hours, cells were harvested and the total RNA was extacted by Qiagen kit. The RNA sample was sent to BGI for RNA expression anaylsis.
 
Contributor(s) Zhu J
Citation(s) 29433542
Submission date Aug 14, 2017
Last update date Jul 25, 2021
Contact name Qiangzu Zhang
E-mail(s) qiangzuzhang@gmail.com
Organization name Lemondata BioTechnology Limited
Street address Nan Hai Da Dao Chuang Shi Ji Bin Hai Hua Yuan Building9 9A , Nanshan District, Shenzhen City, Guangdong Province
City Shenzhen
ZIP/Postal code 518054
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM2742434 NC1
GSM2742435 NC2
GSM2742436 NC4
Relations
BioProject PRJNA398272
SRA SRP115428

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102653_RAW.tar 13.8 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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