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Series GSE10378 Query DataSets for GSE10378
Status Public on May 01, 2008
Title Desiccation and control transcriptomes of Rhodococcus jostii RHA1
Organism Rhodococcus jostii RHA1
Experiment type Expression profiling by array
Summary Here we report the first transcriptomic analysis of a Gram-positive bacterium to desiccation. Filtered RHA1 cells incubated at either low relative humidity (20%), as an air drying treatment, or high relative humidity (100%), as a control, were transcriptionally profiled over a comprehensive time series.
Keywords: stress response time course
 
Overall design Three biological replicates from both the desiccation and control experiments were analyzed using two-colour microarrays. Over a time series for each experiment, Cy-labelled cDNA from treated and time-zero cells were hybridized, with a dye swap for one of the replicates.
 
Contributor(s) LeBlanc JC, Gonçalves ER, Mohn WW
Citation(s) 18326668
Submission date Feb 04, 2008
Last update date May 25, 2012
Contact name Justin Christian LeBlanc
Phone 604-822-5646
Fax 604-822-6041
Organization name University of British Columbia
Department Microbiology & Immunology
Lab Dr. William W. Mohn
Street address 2350 Health Sciences Mall
City Vancouver
State/province British Columbia
ZIP/Postal code V6T 1Z3
Country Canada
 
Platforms (2)
GPL3918 MERH03-S1-0002 (Rhodococcus sp. RHA1 22K)
GPL6703 MERH03-S1-0003 (Rhodococcus sp. RHA1 11K)
Samples (42)
GSM262274 Rhodococcus jostii RHA1 desiccated at 20% relative humidity for 30 min, replicate 1
GSM262283 Rhodococcus jostii RHA1 desiccated at 20% relative humidity for 30 min, replicate 2
GSM262284 Rhodococcus jostii RHA1 desiccated at 20% relative humidity for 30 min, replicate 3
Relations
BioProject PRJNA108117

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Supplementary data files not provided
Processed data included within Sample table

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