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Series GSE10380 Query DataSets for GSE10380
Status Public on Sep 22, 2009
Title Analysis of severe feather pecking behavior in a high feather pecking selection line
Organism Gallus gallus
Experiment type Expression profiling by array
Summary Even though feather pecking (FP) in laying hens has been extensively studied, a good solution to prevent chickens from this behavior under commercial circumstances has not been found. Selection against FP behavior is possible, but for a more effective selection across different populations, it is necessary to characterize the genetic mechanism associated with this behavior. In this study, we use a high FP selection line, which has been selected for 8 generations. We present evidence of the presence of a major dominant allele affecting the FP behavior by using an argument based on the presence of mixture in the distribution of the observed FP and by studying the evolution of the proportion of very high FP along the sequence of 8 generations. This hypothesis is further supported by the fact that the gene transcription profile of the birds performing high FP differs from the profile of the other birds performing FP (456 genes differentially expressed from a total of 14,077 investigated genes).

Keywords: severe feather pecking , selection , modeling , inheritance pattern
 
Overall design From each selection line (high feather pecking line, low feather pecking line and control line) 60 animals were randomly selected. Within each line the birds were randomly assigned to a cage of 20. The cages were kept in a randomized block design. Number of samples analyzed in total: 179 (60 high feather pecking line, 60 low feather pecking line, 59 control line samples. Common reference design using total-RNA purified from brain from a single F1 cross between the high and low feather pecking line as reference.
 
Contributor(s) Labouriau R, Kjaer JB, Abreu GC, Hedegaard J, Buitenhuis AJ
Citation(s) 19762856, 19925670, 20709970
Submission date Feb 05, 2008
Last update date Mar 19, 2012
Contact name Jakob Hedegaard
E-mail(s) Jakob.Hedegaard@ki.au.dk
Phone (+45)89991363
Organization name Aarhus University, Faculty of Agricultural Sciences
Department Department of Genetics and Biotechnology
Lab Molecular Genetics and System Biology
Street address PO-box 50
City Tjele
ZIP/Postal code DK-8830
Country Denmark
 
Platforms (1)
GPL5480 ARK-Genomics G. gallus 20K v1.0
Samples (179)
GSM262297 Brain_animal-4453_line-61
GSM262298 Brain_animal-4626_line-6
GSM262299 Brain_animal-4535_line-61
Relations
BioProject PRJNA108119

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10380_RAW.tar 429.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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