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| Status |
Public on Apr 10, 2018 |
| Title |
Single-cell RNA sequencing of sensory neurons in the mouse dorsal horn |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We have used large-scale single-cell RNA sequencing (RNA-seq) to classify sensory neurons in the mouse dorsal horn, with the purpose of identifying neuronal subclasses, in particular making a systematic and comprehensive molecular classification of spinal cord sensory neurons, providing the neuronal basis for somatic sensation.
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| |
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| Overall design |
1545 single cells from the mouse brain dorsal horn: 637 from strain C57/bl6, 537 from a vGat-cre-tdTomato line, and 371 from a vGlut2-eGFP line.
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| |
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| Contributor(s) |
Häring M, Zeisel A, Linnarsson S, Ernfors P |
| Citation(s) |
29686262 |
| |
| Submission date |
Sep 13, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Sten Linnarsson |
| Organization name |
Karolinska Institutet
|
| Department |
Medical Biochemistry and Biophysics
|
| Lab |
Molecular Neurobiology
|
| Street address |
Scheeles väg 1
|
| City |
Stockholm |
| ZIP/Postal code |
171 65 |
| Country |
Sweden |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (1545)
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| Relations |
| BioProject |
PRJNA407224 |
| SRA |
SRP117627 |
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