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Series GSE104188 Query DataSets for GSE104188
Status Public on Dec 01, 2017
Title Transcriptome profile of vegetative and cyst cells states of Azospirillum brasilense sp7
Organism Azospirillum brasilense
Experiment type Expression profiling by high throughput sequencing
Summary We report the differences in the transcriptome profile (as measured by RNA seq) of vegetative versus encysted cell states of A. brasilense.
 
Overall design RNA-seq of cyst and vegetative (3 biological replicates) colonies of A. brasilense sp7
 
Contributor(s) Malinich E, Bauer C
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Submission date Sep 25, 2017
Last update date May 15, 2019
Contact name Elizabeth Ann Malinich
E-mail(s) eczerwin@umail.iu.edu
Organization name Indiana University
Department Biology
Lab Carl Bauer
Street address 212 S Hawthorne Dr Rm313
City Bloomington
State/province IN
ZIP/Postal code 47401
Country USA
 
Platforms (1)
GPL24043 Illumina NextSeq 500 (Azospirillum brasilense)
Samples (6)
GSM2791506 Vegetative biol. rep. 1
GSM2791507 Vegetative biol. rep. 2
GSM2791508 Vegetative biol. rep. 3
Relations
BioProject PRJNA412000
SRA SRP118786

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104188_A_brasilense_RNA-seq_differential_expression_of_cyst_over_vegetative_cells.xlsx 570.4 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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