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Series GSE104321 Query DataSets for GSE104321
Status Public on Sep 29, 2017
Title small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages) and Brain samples of 6 other killifish species
Organisms Iconisemion striatum; Nothobranchius furzeri; Nothobranchius kuhntae; Nothobranchius rachovii; Nothobranchius pienaari; Nothobranchius kadleci; Nothobranchius korthausae
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The RNA-seq data contain 3 tissues (brain, liver, skin) of N. furzeri strains MZM-0410 and GRZ plus 2 biological replicates of brain of 6 other killifish species.
Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
 
Overall design 162 samples: 4-5 biological replicates per tissue and N. furzeri strain (N=150) plus 2 biological replicates of brain of 6 other killifish species.
 
Contributor(s) Baumgart M, Barth E, Groth M, Koch P, Marz M, Platzer M, Cellerino A
Citation(s) 28874118
Submission date Sep 27, 2017
Last update date May 15, 2019
Contact name JenAge Project
E-mail(s) geo-data@jenage.de
Organization name Leibniz Institute for Age Research - Fritz Lipmann Institute
Street address Beutenbergstr. 11
City Jena
ZIP/Postal code D-07745
Country Germany
 
Platforms (7)
GPL19871 Illumina HiSeq 2500 (Nothobranchius furzeri)
GPL21836 Illumina HiSeq 2500 (Aphyosemion striatum)
GPL22848 Illumina HiSeq 2500 (Nothobranchius korthausae)
Samples (162)
GSM2438555 JG10_1_GTAGAG_L007_R1_001
GSM2438556 JG10_3_GTAGAG_L007_R1_001
GSM2438557 JG11_1_GTCCGC_L008_R1_001
This SubSeries is part of SuperSeries:
GSE92854 small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages), embryonic samples of N. furzeri and 6 other killifish species
Relations
BioProject PRJNA412694
SRA SRP120042

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104321_RAW.tar 840.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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