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Series GSE104339 Query DataSets for GSE104339
Status Public on Jan 01, 2018
Title Profiling DNA methylation in nematodes
Organisms Trichinella spiralis; Romanomermis culicivorax; Trichuris muris; Plectus sambesii
Experiment type Methylation profiling by high throughput sequencing
Summary DNA methylation in basal nematodes analysed by bisulfite sequencing
 
Overall design Bisulfite sequencing of DNA extracted from adult nematodes
 
Contributor(s) Sarkies P
Citation(s) 29459678
Submission date Sep 27, 2017
Last update date Jul 25, 2021
Contact name Peter Sarkies
E-mail(s) psarkies@imperial.ac.uk
Organization name Imperial College London
Department MRC Clinical Sciences Centre
Street address Du Cane Road
City London
ZIP/Postal code W12 0NN
Country United Kingdom
 
Platforms (4)
GPL24053 Illumina HiSeq 2500 (Plectus sambesii)
GPL24054 Illumina HiSeq 2500 (Romanomermis culicivorax)
GPL24055 Illumina HiSeq 2500 (Trichinella spiralis)
Samples (4)
GSM2795614 Plectus sambesii
GSM2795615 Romanomermis culicivorax
GSM2795616 Trichinella spiralis
Relations
BioProject PRJNA412389
SRA SRP118995

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104339_RAW.tar 110.0 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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