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Series GSE104722 Query DataSets for GSE104722
Status Public on Oct 06, 2020
Title Expression Data human IDH1 mutant and wild-type high grade gliomas
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Gene expression data generated for the purpose of correlating differentially-expressed genes between IDH1 mutant and IDH1 wild-type high grade gliomas with differential hydroxymethylcytosine profiles as determined using
Illumina EPIC BeadChip platform.
 
Overall design RNA isolated directly from fresh-frozen human high grade gliomas.
 
Contributor(s) Kongkham P, Jain H
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 08, 2017
Last update date Jul 25, 2021
Contact name Paul N Kongkham
Organization name University of Toronto
Department Surgery
Lab Kongkham Lab
Street address 399 Bathurst St, WW4-450
City Toronto
State/province ON
ZIP/Postal code M5T 2S8
Country Canada
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (20)
GSM2806624 Gene expression IDH1 mutant 2165
GSM2806625 Gene expression IDH1 mutant 4166
GSM2806626 Gene expression IDH1 mutant 2475
This SubSeries is part of SuperSeries:
GSE104724 Expression data and methylation analysis of IDH1 mutant and wild-type high grade gliomas
Relations
BioProject PRJNA413642

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104722_RAW.tar 160.2 Mb (http)(custom) TAR (of CEL)
GSE104722_normalized_data_with_genename.txt.gz 2.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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