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Series GSE105059 Query DataSets for GSE105059
Status Public on Dec 26, 2018
Title Tumor suppressor miRNA inhibits medulloblastoma growth and sensitizes vincristine and radiation response by inducing spindle defects and DNA damage
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Medulloblastoma (MB) is the most common malignant brain tumor in children. Despite recent improvements in overall survival, only a modest percentage of patients survive high-risk MB. The devastating side effects of radiation and chemotherapy substantially reduce qualify of life for surviving patients. We identified a novel tumor suppressor miRNA that sensitizes both ionizing radiation and vincristine responses in medulloblastoma. To understand the mechanism by which the tumor suppressor miR-584-5p may act as a tumor suppressor and therapy sensitizer, we performed microarray analysis in D425Med and D458Med medulloblastoma cells transfected with scrambled (miR-NC) or miR-584-5p mimic (miR-584-5p).
 
Overall design miRNA knockdown experiment with two MB cell lines
 
Contributor(s) Abdelfattah N, Panneerdoss S, Chen Y, Rao M
Citation(s) 30382096
Submission date Oct 17, 2017
Last update date Jul 25, 2021
Contact name Yidong Chen
E-mail(s) cheny8@uthscsa.edu
Phone 2105629163
Organization name UT Health Science Center at San Antonio
Department Population Health Sciences
Street address 8403 Floyd Curl Drive, MSC 7784
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platforms (1)
GPL10904 Illumina HumanHT-12 V4.0 expression beadchip (gene symbol)
Samples (4)
GSM2817076 D-425 Med -miR-NC
GSM2817077 D-425 Med -miR-584-5p
GSM2817078 D-458 Med -miR-NC
Relations
BioProject PRJNA414531

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105059_RAW.tar 6.4 Mb (http)(custom) TAR (of IDAT)
GSE105059_non-normalized.txt.gz 642.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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