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Series GSE105162 Query DataSets for GSE105162
Status Public on May 01, 2018
Title Suppression of regulatory T cells by autoreactive CD8+ T effector cells in rheumatoid arthritis
Organism Homo sapiens
Experiment type Other
Summary Autoreactive CD8+ T effector (eff) cells specific to vimentin, actin cytoplasmic 1, or non-muscle myosin heavy chain 9 epitopes, evade regulatory T (Treg) cells in patients with rheumatoid arthritis undergoing worsening disease and who would become non-responders to tumor necrosis factor (TNF)-α inhibitor therapy, in contrast to autoreactive CD8+ T naïve (N) cells that are efficiently controlled by Treg cells in healthy individuals or patients who would become responders.
Gene expression analysis revealed that the autoreactive CD8+ TN cell subset is comprised of a heterogeneous population of cells at various stages of development in healthy individuals or patients. Mechanistically, the production of TNF-α by CD8+ TN cells and the killing activity by CD8+ Teff cells in response to the relevant self-antigens influence the endorsement or suppression of Treg function, respectively. These data provide evidence of a previously undescribed role of such mechanisms in the progression and therapy of a prototypical human autoimmune disease, such as rheumatoid arthritis.
 
Overall design Nanostring gene expression analysis was performed on RNA extracted from Naïve (N) and effector (Eff) CD8+ T lymphocytes, specific for apoptotic epitopes, sorted from patients with rheumatoid arthritis (P) and from healthy donors (HDs), and 26 samples were analysed: 5 N from HDs, 4 Eff from HDs, 9 N from P and 8 Eff from P.
 
Contributor(s) Martire C, Cammarata I, Citro A, Raimondo D, Carone C, Peruzzi G, Cerboni C, Santoni A, Sideny J, Sette A, Paroli M, Caccavale R, Milanetti E, Riminucci M, Piconese S, Scrivo R, Valesini G, Cariani E, Barnaba V
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Submission date Oct 19, 2017
Last update date Jul 25, 2021
Contact name domenico raimondo
E-mail(s) domenico.raimondo@uniroma1.it
Organization name Sapienza University of Rome
Department Molecular Medicine
Lab Stem cells
Street address Viale Regina Elena 324
City Rome
ZIP/Postal code 00161
Country Italy
 
Platforms (1)
GPL24155 nCounter SC Human Immunology V2
Samples (26)
GSM2823729 HDs_Eff_s10_exp6
GSM2823730 HDs_Eff_s12_exp6
GSM2823731 HDs_Eff_s13_exp6
Relations
BioProject PRJNA414984

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105162_RAW.tar 180.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table

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