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Series GSE10675 Query DataSets for GSE10675
Status Public on Dec 19, 2008
Title methotrexate treatment-dynamics of Arabidopsis transcriptome during folate depletion
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary cea06-02_folate - methotrexate treatment - global analysis of the folate metabolism in Arabidopsis - Treatment of cells of Arabidopsis by methotrexate which is an inhibitor of the synthesis of the folate. Consequently, the pool of folates presents a strong reduction. The goal of this project is to look at the variations of expression in the Arabidopsis genome and specifically in some genes implied in the metabolism of the folate.
Keywords: time course,treated vs untreated comparison
 
Overall design 10 dye-swap - CATMA arrays
Web link http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=166
 
Contributor(s) Renou JP, Yu A, Stephane R, Martin-Magniette ML
Citation(s) 18931140
Submission date Feb 29, 2008
Last update date May 03, 2012
Contact name Agnes Yu
E-mail(s) yu@evry.inra.fr
Organization name INRA
Department URGV
Lab ADT
Street address 2 rue Gaston Cremieux CP 5708
City Evry Cedex
ZIP/Postal code 91057
Country France
 
Platforms (1)
GPL4346 URGV Arabidopsis thaliana 25K CATMA_v2.2
Samples (20)
GSM269896 13555938 - MTX_6h_A vs MTX_2h_A
GSM269897 13555937 - MTX_2h_A vs MTX_6h_A
GSM269898 13557336 - MTX_24h_A vs MTX_6h_A
Relations
BioProject PRJNA107655

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10675_RAW.tar 40.8 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
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