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Status |
Public on Feb 01, 2018 |
Title |
A transcriptomic and functional analysis of the interaction between Caenorhabditis elegans and Stenotrophomonas maltophilia |
Organism |
Caenorhabditis elegans |
Experiment type |
Expression profiling by array
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Summary |
The goal of this study was to elucidate genes that are employed by the bacterivorous nematode Caenorhabditis elegans to respond to the emerging nosocomial bacterial pathogen Stenotrophomonas maltophilia.
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Overall design |
12 microarrays (4 per bacterial treatment) were used to identify genes that were differentially expressed when exposed to virulent (JCMS) and avirulent (K279a) strains of S. maltophilia and an avirulent (OP50) strain of E. coli.
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Contributor(s) |
White CV, Herman MA |
Citation(s) |
30177956 |
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Submission date |
Nov 22, 2017 |
Last update date |
May 16, 2019 |
Contact name |
Michael A Herman |
E-mail(s) |
mherman@ksu.edu
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Organization name |
Kansas State University, Ecological Genomics Institute
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Department |
Division of Biology
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Street address |
266 Chalmers Hall
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City |
Manhattan |
State/province |
KS |
ZIP/Postal code |
66506 |
Country |
USA |
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Platforms (1) |
GPL16196 |
NimbleGen C. elegans 12x135K microarrays |
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Samples (12)
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Relations |
BioProject |
PRJNA419529 |