|
| Status |
Public on Jun 25, 2019 |
| Title |
Genome-wide profiling at single-nucleotide resolution of brain cell types in schizophrenia [WGBS] |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
We carried out cell-type specific whole genome bisulfite sequencing from BA46 that underwent fluorescence-activated nuclei sorting (FANS).
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| |
|
| Overall design |
We sampled 61 unique individuals, 29 schizophrenia patients and 32 control, and isolated NeuN+ and OLIG2+ cells from brain tissue (BA46). We generated 95 WGBS as well as whole-genome sequences of 54 individuals. This series contains only the WGBS data.
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| |
|
| Contributor(s) |
Yi SV |
| Citation(s) |
31288836, 33795684 |
| Submission date |
Dec 05, 2017 |
| Last update date |
Apr 20, 2021 |
| Contact name |
Soojin V Yi |
| E-mail(s) |
soojinyi@gatech.edu
|
| Organization name |
Georgia Institute of Technology
|
| Department |
School of Biology
|
| Street address |
950 Atlantic Dr
|
| City |
Atlanta |
| State/province |
GA |
| ZIP/Postal code |
30318 |
| Country |
USA |
| |
|
| Platforms (2) |
|
| Samples (95)
|
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| This SubSeries is part of SuperSeries: |
| GSE108066 |
Contribution of differential cell-specific methylation to schizophrenia |
|
| Relations |
| BioProject |
PRJNA421218 |
| SRA |
SRP126677 |
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