NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE108339 Query DataSets for GSE108339
Status Public on Aug 16, 2019
Title The role of MLL1 in post natal myogenesis
Organism Mus musculus
Experiment type Expression profiling by array
Summary The trithorax H3K4 histone methyltransferase (HMT) MLL1 has important roles for early embryonic development, hematopoiesis and neurogenesis through regulation of Hox and homeodomain factor expression. MLL1 has been previously implicated in activation of Myf5 expression through an interaction with Pax7. Here, we find that in vivo, MLL1 is necessary for efficient muscle regeneration, and for maintenance of muscle stem and progenitor cells. Loss of MLL1 in cultured myoblasts reveals an essential role for proliferation and expression of both Myf5 and Pax7. Loss of Myf5 is conditional on loss of Pax7 and exogenous Pax7 rescues Myf5 in the absence of MLL1 suggesting a role for MLL1 in Pax7 expression but not Pax7 activity. Importantly, Mll1 knockout results in a minor decrease to H3K4me3 at Pax7, a 40% decrease in Pax7 mRNA and an 85% decrease in Pax7 protein, suggesting a previously proposed non-HMT role for MLL1 may involve linking transcription to translation.
 
Overall design For in-vitro analysis of loss of MLL1, myoblasts were isolated from Mll1fl/fl mice (Jude et al., 2007) kindly provided by Patricia Ernst, crossed with Rosa26-CreERT2 mice (Seibler et al., 2003). Myoblast line was established in culture for 10 days followed by treatment to excise exon 2 of MLL1 for knockout. Control and MLL1 KO samples are from the same cell line treated or not treated with 4-OHT.
 
Contributor(s) Addicks GC, Rudnicki MA
Citation(s) 31534153
Submission date Dec 20, 2017
Last update date Sep 20, 2019
Organization Ottawa Hospital Research Institute
Phone (613) 737-8899 -73255
Department Cellular and Molecular Medicine
Lab Ottawa Bioinformatics Core Facility
Street address 501 Smyth Rd.
City Ottawa
State/province ON
ZIP/Postal code K1H 8L6
Country Canada
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (2)
GSM2895574 Control
GSM2895575 MLL1 KO
Relations
BioProject PRJNA423228

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108339_RAW.tar 8.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap