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Series GSE108577 Query DataSets for GSE108577
Status Public on Feb 16, 2018
Title Rescue of Fragile X syndrome by DNA methylation editing of the FMR1
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29456084
Submission date Dec 27, 2017
Last update date Jul 25, 2021
Contact name Shawn Liu
E-mail(s) shawnliu@wi.mit.edu
Organization name Whitehead Institute for Biomedical Research
Lab Rudolf Jaenisch
Street address 455 MAIN STREET
City CAMBRIDGE
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (35)
GSM2742477 Cas9 ChIP from line1
GSM2742478 Input of Cas9 ChIP from line 1
GSM2742479 Cas9 ChIP from a mock FXS iPSC line
This SuperSeries is composed of the following SubSeries:
GSE102655 Rescue of Fragile X syndrome by DNA methylation editing of the FMR1 [ChIP-seq]
GSE102684 Rescue of Fragile X syndrome by DNA methylation editing of the FMR1 [ChIP-seq II]
GSE108171 Rescue of Fragile X syndrome neurons by DNA methylation editing of the FMR1 gene [methylation]
Relations
BioProject PRJNA427714

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108577_RAW.tar 2.6 Gb (http)(custom) TAR (of BW, COV, TXT, WIG)
SRA Run SelectorHelp

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