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Series GSE108769 Query DataSets for GSE108769
Status Public on Jan 05, 2018
Title Histone variant H3.3-mediated chromatin remodeling is essential for paternal genome activation in mouse preimplantation embryos
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary H3.3-mediated paternal chromatin remodeling is essential for the development of preimplantation embryos and the activation of the paternal genome during embryogenesis.
 
Overall design We collected embryos of WT, mH3.3KD and H3.3-addback at 50h after ICSI (8-cell or 16-cell stage). RNA-seq results confirmed excellent knockdown of both H3.3A and H3.3B mRNAs in mH3.3KD and H3.3-addback embryos.
 
Contributor(s) Kong Q, Banaszynski LA
Citation(s) 29358330
Submission date Jan 04, 2018
Last update date Jun 26, 2019
Contact name Xiaolei Zhang
E-mail(s) zhangxiaolei217@neau.edu.cn
Organization name Northeast Agricultural University
Street address No.59 Mucai street
City Harbin
ZIP/Postal code 150000
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (3)
GSM2913081 WT
GSM2913082 H3.3KD
GSM2913083 H3.3-addback
Relations
BioProject PRJNA428516
SRA SRP130933

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108769_All_sample_genes.fpkm_tracking.gz 745.0 Kb (ftp)(http) FPKM_TRACKING
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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