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Series GSE109257 Query DataSets for GSE109257
Status Public on Feb 01, 2020
Title Comparison of expression profiles of SCD::Keap1F/F and SCD::Keap1F/F::Tie1-Cre mouse pulmonary primary endothelial cells(MPPCECs)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This experiment evaluate the expression level of Nrf2 genes transcript in mouse primary endothelial cells of a pathology model mice of Sickle cell disease (SCD). Constitutive activation of Nrf2 in SCD suppresses inflammation and organ injury. In the present study we aim to assess the benefit of specific- cell Nrf2 activation in endothelial ceels exclusively.
 
Overall design mRNA profiles of SCD::Keap1F/F and SCD::Keap1F/F::Tie1-Cre of MPPCECs were generated by deep sequencing, in triplicate.
 
Contributor(s) Keleku-Lukwete N, Mikiko S, Panda H, Otsuki A, Katsuoka F, Saitou R, Saigusa D, Uruno A, Yamamoto M
Citation(s) 31015205
Submission date Jan 16, 2018
Last update date Feb 01, 2020
Contact name Masayuki Yamamoto
E-mail(s) masiyamamoto@med.tohoku.ac.jp
Phone 81-22-717-8084
Organization name Tohoku University Graduate School of Medicine
Department Medical Biochemistry
Street address 2-1 Seiryo-machi, Aoba-ku
City Sendai
ZIP/Postal code 980-8575
Country Japan
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM2935975 Control_rep1
GSM2935976 Control_rep2
GSM2935977 Control_rep3
Relations
BioProject PRJNA430247
SRA SRP131019

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109257_gene_exp.diff.gz 814.9 Kb (ftp)(http) DIFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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