|
| Status |
Public on Jul 22, 2019 |
| Title |
Spatiotemporal pattern of the transcriptional regulatory landscape of the mouse ventricle after myocardial infarction |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Stress-response gene activity replaces cardiomyocyte lineage-specific program in a transcriptionally discrete infarct border zone
|
| |
|
| Overall design |
RNA-seq & ATAC-seq on left ventricular remote and border zone tissues at 3, 7 and 14 days after myocardial infarction
|
| |
|
| Contributor(s) |
van Duijvenboden K, Janssen R, Christoffels VM |
| Citation(s) |
31259610 |
| |
| Submission date |
Feb 06, 2018 |
| Last update date |
Jul 24, 2019 |
| Contact name |
Vincent M. Christoffels |
| E-mail(s) |
v.m.christoffels@amsterdamumc.nl
|
| Phone |
0205667821
|
| Organization name |
Amsterdam UMC
|
| Department |
Medical Biology
|
| Lab |
Vincent Christoffels
|
| Street address |
Meibergdreef 15 K2-159
|
| City |
Amsterdam |
| State/province |
N/A (NA) |
| ZIP/Postal code |
1105 AZ |
| Country |
Netherlands |
| |
|
| Platforms (2) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (36)
|
|
| Relations |
| BioProject |
PRJNA433175 |
| SRA |
SRP132283 |
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