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Series GSE110424 Query DataSets for GSE110424
Status Public on Aug 22, 2018
Title PRMT2 links histone H3R8 asymmetric dimethylation to oncogenic activation and tumorigenesis of glioblastoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Here we show that PRMT2 is highly expressed in GBM, which is correlated with poor prognosis. The silencing of PRMT2 inhibits GBM cell growth and glioblastoma stem cell self-renewal in vitro and suppreses orthotopic tumor growth. Transcriptome analysis demonstrated that PRMT2 depletion leads to significant deregulation of genes mainly associated with cell cycle progression and pathways in cancer. In agreement with previously published results, we show that PRMT2 is responsible for H3R8 asymmetric methylation (H3R8me2a) and that H3R8me2a enrichment at promoters and enhancers is closely correlated with known active histone marks. Furthermore, we show that PRMT2-mediated H3R8me2a is required for the maintenance of target gene expression and that the catalytic activity of PRMT2 is required for its protumorigenic functions. Taken together, this study demonstrates that PRMT2 acts as a transcriptional co-activator for oncogenic gene expression programs in GBM pathogenesis and provides a rationale for PRMT2 targeting in aggressive gliomas.
 
Overall design To examine changes in histone-modification profiles and gene expression after knockdown of PRMT2 in human U87 cells or human primary glioblastoma cells TPC1115.
 
Contributor(s) Dong F, Wu X
Citation(s) 30382083
Submission date Feb 09, 2018
Last update date Mar 21, 2019
Contact name xudong Wu
Organization name Tianjin medical university
Street address Qixiangtai Road
City Tianjin
ZIP/Postal code 300070
Country China
 
Platforms (2)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (19)
GSM2991146 U87_scramble_RNAseq
GSM2991147 U87_shPRMT2_1_RNAseq
GSM2991148 U87_shPRMT2_2_RNAseq
Relations
BioProject PRJNA433671
SRA SRP132593

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110424_RAW.tar 1.4 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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