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Series GSE110534 Query DataSets for GSE110534
Status Public on Mar 05, 2018
Title Allele-specific DNA methylation of disease susceptibility genes in Japanese patients with inflammatory bowel disease
Organism Homo sapiens
Experiment type Methylation profiling by SNP array
Summary We determined cis-regulated allele-specific DNA methylation (ASM) around IBD susceptibility genes in CD4+ effector/memory T cells (Tem) in lamina propria mononuclear cells (LPMCs) in patients with IBD
 
Overall design We performed MSNP analysis to detect allele specific methylation.
 
Contributor(s) Kakuta Y
Citation(s) 29547621
Submission date Feb 13, 2018
Last update date May 23, 2019
Contact name Yoichi Kakuta
E-mail(s) ykakuta@mail.tains.tohoku.ac.jp
Phone 81227177171
Organization name Tohoku University
Street address 1-1 Seiryo Aoba
City Sendai
State/province Miyagi
ZIP/Postal code 980-8574
Country Japan
 
Platforms (1)
GPL22697 [Axiom_TSB_JPA1] Affymetrix Axiom® TSB_JPA1 Japonica Array Ver 1
Samples (15)
GSM2995333 CD1D
GSM2995334 CD2D
GSM2995335 CD3D
Relations
BioProject PRJNA433946

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110534_RAW.tar 191.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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