|
| Status |
Public on Apr 12, 2008 |
| Title |
P. vivax: proof-of-principle global transcription analysis from two wild isolates |
| Platform organism |
Plasmodium vivax |
| Sample organisms |
Plasmodium falciparum; Plasmodium vivax |
| Experiment type |
Expression profiling by array
|
| Summary |
The complete genome sequence of the P. vivax Sal-1 strain allowed the design of a first version array representing 1 oligo/2 kb of coding sequences (http://zblab.sbs.ntu.edu.sg/vivax/index.html). Here, proof-of-principle experiments using total RNA of parasites obtained from the Sal-1 strain, from P. falciparum and from parasites obtained directly from two human patients are presented.
Keywords: expression profiles
|
| |
|
| Overall design |
To determine the extent of cross-hybridization of P. falciparum with P. vivax, and to determine overlaps in expression profiles of the P. vivax Sal1 monkey-adapted strain vs wild isolates, single dual hybridization analyses were performed.
|
| |
|
| Contributor(s) |
Vêncio RZ, Yamamoto MM, Fernandez-Becerra C, del Portillo HA |
| Citation(s) |
24341380 |
| Submission date |
Apr 05, 2008 |
| Last update date |
Jul 29, 2019 |
| Contact name |
Hernando A del Portillo |
| E-mail(s) |
hernandoa.delportillo@cresib.cat
|
| Organization name |
Barcelona Centre for International Health Research
|
| Lab |
malaria
|
| Street address |
rosello, 132 (4a)
|
| City |
Barcelona |
| State/province |
Barcelona |
| ZIP/Postal code |
08036 |
| Country |
Spain |
| |
|
| Platforms (1) |
| GPL6667 |
P. vivax exon array v1.0 using oligos designed by Z. Bozdech and G. Hu |
|
| Samples (3) |
| GSM278884 |
Pvivax vs Pfalciparum control specificity 251485710001 |
| GSM278885 |
Pvivax Sal1 vs Pvivax patient1 251485710006 |
| GSM278886 |
Pvivax Sal1 vs Pvivax patient2 251485710007 |
|
| Relations |
| BioProject |
PRJNA107065 |
