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GEO accession:
Series GSE110760
Query DataSets for GSE110760
Status
Public on Feb 17, 2018
Title
Massively parallel dissection of human accelerated regions in human and chimpanzee neural progenitors
Organisms
Pan troglodytes
;
Homo sapiens
Experiment type
Other
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Feb 16, 2018
Last update date
Jun 18, 2019
Contact name
Jay Shendure
Organization name
University of Washington
Department
Genome Sciences
Lab
Shendure
Street address
3720 15th Ave NE
City
Seattle
State/province
WA
ZIP/Postal code
98195-5065
Country
USA
Platforms (5)
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GPL15520
Illumina MiSeq (Homo sapiens)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21121
Illumina NextSeq 500 (Pan troglodytes)
GPL23423
Illumina HiSeq 4000 (Pan troglodytes)
Samples (107)
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GSM3016026
WTc N2 RNA rep1
GSM3016027
WTc N2 RNA rep2
GSM3016028
WTc N2 RNA rep3
GSM3016029
WTc N2 HAR permutation RNA rep1
GSM3016030
WTc N2 HAR permutation RNA rep2
GSM3016031
WTc N2 HAR permutation RNA rep3
GSM3016032
HS1-11 N2 RNA rep1
GSM3016033
HS1-11 N2 RNA rep2
GSM3016034
HS1-11 N2 RNA rep3
GSM3016035
WTc N3 RNA rep1
GSM3016036
WTc N3 RNA rep2
GSM3016037
WTc N3 RNA rep3
GSM3016038
WTc N3 HAR permutation RNA rep1
GSM3016039
WTc N3 HAR permutation RNA rep2
GSM3016040
WTc N3 HAR permutation RNA rep3
GSM3016041
HS1-11 N3 RNA rep1
GSM3016042
HS1-11 N3 RNA rep2
GSM3016043
HS1-11 N3 RNA rep3
GSM3016044
WTc N2 DNA rep1
GSM3016045
WTc N2 DNA rep2
GSM3016046
WTc N2 DNA rep3
GSM3016047
WTc N2 HAR permutation DNA rep1
GSM3016048
WTc N2 HAR permutation DNA rep2
GSM3016049
WTc N2 HAR permutation DNA rep3
GSM3016050
HS1-11 N2 DNA rep1
GSM3016051
HS1-11 N2 DNA rep2
GSM3016052
HS1-11 N2 DNA rep3
GSM3016053
WTc N3 DNA rep1
GSM3016054
WTc N3 DNA rep2
GSM3016055
WTc N3 DNA rep3
GSM3016056
WTc N3 HAR permutation DNA rep1
GSM3016057
WTc N3 HAR permutation DNA rep2
GSM3016058
WTc N3 HAR permutation DNA rep3
GSM3016059
HS1-11 N3 DNA rep1
GSM3016060
HS1-11 N3 DNA rep2
GSM3016061
HS1-11 N3 DNA rep3
GSM3016062
Pt2A N2 RNA rep1
GSM3016063
Pt2A N2 RNA rep2
GSM3016064
Pt2A N2 RNA rep3
GSM3016065
Pt2A N2 HAR permutation RNA rep1
GSM3016066
Pt2A N2 HAR permutation RNA rep2
GSM3016067
Pt2A N2 HAR permutation RNA rep3
GSM3016068
Pt5C N2 RNA rep1
GSM3016069
Pt5C N2 RNA rep2
GSM3016070
Pt5C N2 RNA rep3
GSM3016071
Pt2A N3 RNA rep1
GSM3016072
Pt2A N3 RNA rep2
GSM3016073
Pt2A N3 RNA rep3
GSM3016074
Pt2A N3 HAR permutation RNA rep1
GSM3016075
Pt2A N3 HAR permutation RNA rep2
GSM3016076
Pt2A N3 HAR permutation RNA rep3
GSM3016077
Pt5C N3 RNA rep1
GSM3016078
Pt5C N3 RNA rep2
GSM3016079
Pt5C N3 RNA rep3
GSM3016080
Pt2A N2 DNA rep1
GSM3016081
Pt2A N2 DNA rep2
GSM3016082
Pt2A N2 DNA rep3
GSM3016083
Pt2A N2 HAR permutation DNA rep1
GSM3016084
Pt2A N2 HAR permutation DNA rep2
GSM3016085
Pt2A N2 HAR permutation DNA rep3
GSM3016086
Pt5C N2 DNA rep1
GSM3016087
Pt5C N2 DNA rep2
GSM3016088
Pt5C N2 DNA rep3
GSM3016089
Pt2A N3 DNA rep1
GSM3016090
Pt2A N3 DNA rep2
GSM3016091
Pt2A N3 DNA rep3
GSM3016092
Pt2A N3 HAR permutation DNA rep1
GSM3016093
Pt2A N3 HAR permutation DNA rep2
GSM3016094
Pt2A N3 HAR permutation DNA rep3
GSM3016095
Pt5C N3 DNA rep1
GSM3016096
Pt5C N3 DNA rep2
GSM3016097
Pt5C N3 DNA rep3
GSM3893719
HS1-11 N2 RNA rep1 (5' assay)
GSM3893720
HS1-11 N2 RNA rep2 (5' assay)
GSM3893721
HS1-11 N2 RNA rep3 (5' assay)
GSM3893722
HepG2 RNA rep1
GSM3893723
HepG2 RNA rep2
GSM3893724
HepG2 RNA rep3
GSM3893725
HS1-11 N2 DNA rep1 (5' assay)
GSM3893726
HS1-11 N2 DNA rep2 (5' assay)
GSM3893727
HS1-11 N2 DNA rep3 (5' assay)
GSM3893728
HS1-11 N2 barcode assignment 5p assay
GSM3893729
HepG2 DNA rep1
GSM3893730
HepG2 DNA rep2
GSM3893731
HepG2 DNA rep3
GSM3893732
HS1-11 N2 ChIP-seq input rep1
GSM3893733
HS1-11 N2 ChIP-seq input rep2
GSM3893734
HS1-11 N2 ChIP-seq H3K27ac rep1
GSM3893735
HS1-11 N2 ChIP-seq H3K27ac rep2
GSM3893736
HS1-11 N3 ChIP-seq input rep1
GSM3893737
HS1-11 N3 ChIP-seq input rep2
GSM3893738
HS1-11 N3 ChIP-seq H3K27ac rep1
GSM3893739
HS1-11 N3 ChIP-seq H3K27ac rep2
GSM3893740
Pt2A N2 HAR control RNA rep1
GSM3893741
Pt2A N2 HAR control RNA rep2
GSM3893742
Pt2A N2 HAR control RNA rep3
GSM3893743
Pt2A N2 HAR control DNA rep1
GSM3893744
Pt2A N2 HAR control DNA rep2
GSM3893745
Pt2A N2 HAR control DNA rep3
GSM3893746
Pt2A N2 ChIP-seq input rep1
GSM3893747
Pt2A N2 ChIP-seq input rep2
GSM3893748
Pt2A N2 ChIP-seq H3K27ac rep1
GSM3893749
Pt2A N2 ChIP-seq H3K27ac rep2
GSM3893750
Pt2A N3 ChIP-seq input rep1
GSM3893751
Pt2A N3 ChIP-seq input rep2
GSM3893752
Pt2A N3 ChIP-seq H3K27ac rep1
GSM3893753
Pt2A N3 ChIP-seq H3K27ac rep2
This SuperSeries is composed of the following SubSeries:
GSE110758
Massively parallel dissection of human accelerated regions in human and chimpanzee neural progenitors [human]
GSE110759
Massively parallel dissection of human accelerated regions in human and chimpanzee neural progenitors [chimpanzee]
Relations
BioProject
PRJNA434468
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE110760_RAW.tar
660.9 Mb
(http)
(custom)
TAR (of TSV)
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