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Series GSE110908 Query DataSets for GSE110908
Status Public on Feb 20, 2021
Title RNA Sequencing quantitatively profiles chemical long-term potentiation (LTP) induced gene transcription alteration
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary To identify proteins involved in activity dependent synaptic remodeling that are not caused by changes in mRNA levels we performed RNA-seq and TMT-based quantitative MS.
 
Overall design Examination of cLTP induced gene temporal transcription
 
Contributor(s) Wang Y, Savas J, Bartom ET
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Submission date Feb 20, 2018
Last update date Feb 20, 2021
Contact name Elizabeth Thomas Bartom
E-mail(s) ebartom@northwestern.edu
Organization name NORTHWESTERN UNIVERSITY AT CHICAGO
Department Biochemistry and Molecular Genetics
Lab Bartom
Street address 303 E Superior Ave, SQBRC 7-406
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (10)
GSM3018684 Ctrl_A
GSM3018685 cLTP_5 min_A
GSM3018686 cLTP_10 min_A
Relations
BioProject PRJNA434759
SRA SRP133188

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110908_AllPairwiseComparisons.htseq.edgeR.xlsx 6.3 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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