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Series GSE111083 Query DataSets for GSE111083
Status Public on Feb 04, 2019
Title C. elegans total RNA profiles of worms treated with RNAi for different Integrator complex
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary C. elegans totalRNA profiles of worms treated with RNAi for different Integrator complex genes or L4440 (Control). Worms were grown at 15ºC and samples were taken six days after silencing
 
Overall design C. elegans totalRNA profiles of worms treated with RNAi for different Integrator complex genes or L4440 (Control). Three replicates per sample. Deep sequencing in Illumina HiSeq1500.
 
Citation(s) 30807579
Submission date Feb 25, 2018
Last update date Mar 20, 2019
Contact name María de Toro
E-mail(s) mthernando@riojasalud.es
Organization name Centro de Investigación Biomédica de La Rioja
Department Genomics & Bioinformatics Core Facility
Street address C/Piqueras 98
City Logrono
State/province La Rioja
ZIP/Postal code 26006
Country Spain
 
Platforms (2)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
GPL18730 Illumina HiSeq 1500 (Caenorhabditis elegans)
Samples (45)
GSM3021809 Ints-1_rep1
GSM3021810 Ints-1rep2
GSM3021811 Ints-1_rep3
Relations
BioProject PRJNA435877
SRA SRP133439

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111083_RAW.tar 63.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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