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Series GSE112464 Query DataSets for GSE112464
Status Public on Oct 30, 2018
Title siRNA knockdown of neonatal rat cardiac myocytes and fibroblasts
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Primary neonatal rat cardiac myocytes or fibroblasts were isolated and subjected to siRNA mediated Yap knockdown
 
Overall design Primary cardiac myocytes and fibroblasts were isolated from two-day old rats via neonatal heart dissociation kit (Miltenyi Biotec) according to the manufacturer’s protocol followed by percoll gradient separation. Cells were transfected with siRNAs designed against Yap, or universal negative control siRNAs. Transfected cells were collected 48 hours post transfection for RNAseq.
 
Contributor(s) Flinn MA, O'meara CC, Link BA
Citation(s) 30295714
Submission date Mar 28, 2018
Last update date Oct 30, 2018
Contact name Michael Andrew Flinn
Organization name Medical College of Wisconsin
Department Physiology
Lab O'Meara Lab
Street address 8701 W Watertown Plank Rd
City Wauwatosa
State/province WI
ZIP/Postal code 53226
Country USA
 
Platforms (1)
GPL24782 BGISEQ-500 (Rattus norvegicus)
Samples (12)
GSM3070513 neonatal_rat_cardiomyocyte_neg_1
GSM3070514 neonatal_rat_cardiomyocyte_neg_2
GSM3070515 neonatal_rat_cardiomyocyte_neg_3
Relations
BioProject PRJNA446648
SRA SRP136732

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112464_Process_Data.xlsx 3.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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